Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0916 ATGATTGTTGTGCAATGGTGTATGATGTATGAGCTTGGTCGTCAACCAGCAAACACTAAGCTGTCAAGTGACAAGACAGTCAGGAGAATTCGTGTTAGAGGTGGCAATGTGAAATGGAGGGCTTTGCGATTGGATACTGGAAATTATTCATGGGGTAGTGAAGCTGTGACTCGCAAAACACGTATATTAGATGTGGTTTACAATGCCTCAAACAATGAACTTGTGAGAACTCAAACCCTTGTGAAGAGTGCAATTGTTCAGGTTGATGCTGCTCCTTTCAAGCAGTGGTACCTTCAGCATTATGGTGTTGATATTGGTAGGAAGAAGAAAACAACTGCCAAGAAGGATTCGGCTGAGGAGGGTGAACCTGCTGCTGCTGTTGAAGAGGCAAAGAAAAGTAATCATGTGCTTAGAAAACTAGAGAAGCGTCAGAAGGATCGAAAGCTGGATCCCCACATTGAAGAGCAATTTGGTGGTGGCCGATTGTTGGCTTGCATTTCTTCTCGACCTGGGCAATGTGGCAGAGCTGATGGCTATATATTGGAAGGCAAGGAGTTGGAGTTTTACATGAAGAAGCTCCAGAGGAAGAAGGGAAAGGGTGCTGGTGCTGCTTGA 615 0.4504 MIVVQWCMMYELGRQPANTKLSSDKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTTAKKDSAEEGEPAAAVEEAKKSNHVLRKLEKRQKDRKLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0916 204 MobiDBLite consensus disorder prediction 113 132 - -
Lele40g0916 204 FunFam 40S ribosomal protein S8 146 199 - -
Lele40g0916 204 Pfam Ribosomal protein S8e 9 181 IPR022309 -
Lele40g0916 204 TIGRFAM eS8: ribosomal protein eS8 10 183 IPR001047 GO:0003735|GO:0005840|GO:0006412
Lele40g0916 204 FunFam 40S ribosomal protein S8 15 145 - -
Lele40g0916 204 CDD Ribosomal_S8e_like 10 181 - -
Lele40g0916 204 Gene3D - 15 145 - -
Lele40g0916 204 Gene3D - 146 199 - -
Lele40g0916 204 PANTHER 40S RIBOSOMAL PROTEIN S8 9 199 IPR001047 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0916 Lele-ChrLele40 19740590 19744353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0916 10 204 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 84.103 2.18e-108 308