Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0913 ATGGAGAACGAATTCTTCCTCAATGCCGCTTCCCTTCACTTCGAACCTTCTTCTTATTCCTCAATGCCCACGTGGCAGTCGCTCTCATCCGCCATGGATGTTCAAGTTCAAGCTTCCGTCCTCAATTGCTCTTCCGAGCAACCGCAAGATTGCTTTTACAACACCACCAAATGGGATAAGTCAACGGATCATCATGGTCTTCAATTTGATTCTGCTCTGAGCTCCATGGTTTCTTCGCCGGCAGCGTCGAATTCCAATGTTATGCCCAATAATGAGAATTTCATGATCAGGGAATTGATAGGGAAATTGGGCAACATTGGTACTTCTCCTTACATTAATGGCGGTAATAGCACTGATACTTCGTGTTACAGTACTCCCTTGAGCTCGCCTCCGAAGATGAACATGATGAACCAACTGGTGAAAGAGAACTTACCCAGTTTAGGGAAATCGATGGTTTTGAATTCTAATGTTGCAGAATTCTCATCTGATCCTGGTTTTGCAGAGAGAGCTGCCAAGTTTTCTTGCTTTGGAAGCAGGAGCTTCAATGGCAGAACATACCAACTAGGCATGACCAACGGTCAATTGTCTCTAAGATCTACTCCATCAGTGGAAAATGAGAAGCTCGCTCGAGTTTCTAGTAGTCCTGCTCTGAAAGCACTCGGTGGATCTCAAACGGAAGCGGCAAATTCCCAAGAGGAATCAACCATCTCTGAGCAGACCCCAAATGGGGAAAATGGGGTGAATAATGCGAAATCAAGGAAAAGAAAAGCTTCTTCCAAGGGAAATAATACCAGAGAAACTTCAACTTCAACCAATCCTACTCCCAAGGCTAATGAAACCAATGAAGCTTCAAATGCAAAGCGCAGCAAGCCAAACGAGGGTGACCAAGGGAACGAAAATGGAACCGTGAAGGTAGAAGAAGACCCAAAAGGAGGTACTAGCAATGGAGGAGAAGAGAAACAGACCAAGAGTAATAACTCATCAAAACCTCCTGAACCTCCAAAAGACTACATTCACGTCAGAGCAAGAAGAGGCCAAGCCACTGACAGCCACAGTCTTGCAGAAAGGGTCCGGAGGGAAAAAATCAGTGAGAGGATGAAGCTTCTGCAAGATCTTGTACCGGGTTGCAATAAGGTCACTGGTAAAGCACTCATGCTTGATGAAATCATAAACTATGTGCAGTCATTGCAGCGTCAAGTTGAGTTTTTATCTATGAAACTGGCTTCTGTCAACACCAGGCTGGACTTCAACATTGACAATCTAATCTCAAAAGATATGTTTCAATCAAATAACTCTTTGGCACACCCAACATTCCCTCTAGATTCCTCAGCACAAGCCTTTTATGGGCAACAACACACTCAGCAAAACCCAGGAATCCACAATAACATTCTTAATGGTATTGTGTCCCACAGCACAGTAGACCCATTAGAAACTGCTTCTCTGTGCCAAAACATGGGCATGCAATTACCTCCCCTTAATGGCTTTAATGAAAGTGGTTCTTCTCAGTTTCCAGTAGGATTCTGTGAGGATGACCTTCAAACCTTTGTTCAGATGGGATTTGGGCAAAGTGGACAAGGAAAATCACCCAGTCATTCCCAGAACTTCAACGGTTCAAATCAAGTCACCCATCTGAAAGTTGAACCCTAA 1647 0.442 MENEFFLNAASLHFEPSSYSSMPTWQSLSSAMDVQVQASVLNCSSEQPQDCFYNTTKWDKSTDHHGLQFDSALSSMVSSPAASNSNVMPNNENFMIRELIGKLGNIGTSPYINGGNSTDTSCYSTPLSSPPKMNMMNQLVKENLPSLGKSMVLNSNVAEFSSDPGFAERAAKFSCFGSRSFNGRTYQLGMTNGQLSLRSTPSVENEKLARVSSSPALKALGGSQTEAANSQEESTISEQTPNGENGVNNAKSRKRKASSKGNNTRETSTSTNPTPKANETNEASNAKRSKPNEGDQGNENGTVKVEEDPKGGTSNGGEEKQTKSNNSSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFNIDNLISKDMFQSNNSLAHPTFPLDSSAQAFYGQQHTQQNPGIHNNILNGIVSHSTVDPLETASLCQNMGMQLPPLNGFNESGSSQFPVGFCEDDLQTFVQMGFGQSGQGKSPSHSQNFNGSNQVTHLKVEP 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0913 548 MobiDBLite consensus disorder prediction 217 248 - -
Lele40g0913 548 SMART finulus 352 402 IPR011598 GO:0046983
Lele40g0913 548 FunFam Basic helix-loop-helix transcription factor 343 415 - -
Lele40g0913 548 MobiDBLite consensus disorder prediction 286 314 - -
Lele40g0913 548 MobiDBLite consensus disorder prediction 206 337 - -
Lele40g0913 548 CDD bHLH_AtBPE_like 336 421 - -
Lele40g0913 548 Pfam Helix-loop-helix DNA-binding domain 350 397 IPR011598 GO:0046983
Lele40g0913 548 Coils Coil 393 413 - -
Lele40g0913 548 Gene3D - 343 418 IPR036638 GO:0046983
Lele40g0913 548 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 346 396 IPR011598 GO:0046983
Lele40g0913 548 MobiDBLite consensus disorder prediction 315 331 - -
Lele40g0913 548 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 233 454 IPR024097 GO:0006355
Lele40g0913 548 MobiDBLite consensus disorder prediction 262 285 - -
Lele40g0913 548 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 344 415 IPR036638 GO:0046983
Lele40g0913 548 MobiDBLite consensus disorder prediction 520 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0913 Lele-ChrLele40 19692801 19695334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0913 1 500 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 47.082 2.43e-116 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele40g0913 HLH 4.3e-06 No_clan