Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0907 ATGTCCTCCATGAACATAGGCGATGAGAGTCGCCACCAGCAGCACCGCACGTTCCCGGAGTTAGATTTTCAGGACATGAAGGTGATCTCCGCCGTGGGCCGGGGTGCCAAGGGCGTTGTGTTCGCGGCCACGAGAAATGATGATGCGTCTGGTGAGTATTTAGCTTTGAAAGTGATCTCCAAGGCTTTGATTCAGAAGAAAGCGAAGGCGATGAACAACGGTGACGGCGAGTGCAAGAGGGTATCTTTTGAACAGCATGTGCTGCGTCTTTTGGATCACCCGCTTTTGCCTAGGTTGCGAGGAGTTCTGGAAACCGAGAAGATCCTTGGGTACGCCATCGATTATTGTCCCGGCGGAAATCTCCATTCTCTCCGGAAAAAGCAGACCGAGAAGATGTTTTCCGATGATAGCATAAGGTTTTATGCTGTCGAATTGGTCCTTGCATTGGAGTATCTGCATAATTTGGGAATAGTGTACAGAGATTTGAAGCCAGAGAACATACTGATCCAAGAAAGTGGTCACATAATGCTCGTCGACTTCGATCTATCCAAAAAACTAATCCCGAAATCTCCAAAATCCCAGAGTAGCTCCTCTTCGCCGATTTCCCACACGTCAAAGACGATGGCGATGAAGGACTTACGGAAGAAACGCTTCTTCCGATTCTACAGTTGCTCCGTGCAAACCCCCTCGTCGTACGAACCACAAGCCTCACTGGAATTCCAGTGTCCGCGGCGGAGCGAGTCAAATTCGGTGGAGAAATCGAACTCGTTCGTTGGTACGGAGGAATACGTAGCACCCGAAGTAATAACGGGGAAGGGACATAACTTCGGAGTCGATTGGTGGTCACTCGGCGTCGTCTTATATGAGTTGCTGTACGGAATGACGCCGTTTAAGGGAGAGAACAGGAAAGAAACTTTTCACCGGATTATGACGAAAGAACCGGACTTAACCGGAAAGATGACGCCTTTGAGGGATTTGGTCGCGAAGTTGCTGGAGAAGGATCGTGACCGTAGGATAGAGGTGGAAGGGATCAAAGGTCACGATTTCTTCAGAGGGGTTCAGTGGGACTCGGTTTTGCACGTAGCACGGCCGCCGTATATTCCGTTGAATGAAGTAGGGGACACAAATGGGTTCAAGAAAAATCAAGTGGAGACATTTGTCCATGAGGTATTCTTTGGGAAGGATGGGGAGGAAGAAAAAGGGACCAAAAAAGAAGAAAATAATAATGATGGGGATGATAGAGAGAATAATAAGAACGTGTGGGTGGAGAAGTTGAGTCATCAGAGTCCCGCAGAGAATGATAATTTTTTAATTTTTTGA 1320 0.4795 MSSMNIGDESRHQQHRTFPELDFQDMKVISAVGRGAKGVVFAATRNDDASGEYLALKVISKALIQKKAKAMNNGDGECKRVSFEQHVLRLLDHPLLPRLRGVLETEKILGYAIDYCPGGNLHSLRKKQTEKMFSDDSIRFYAVELVLALEYLHNLGIVYRDLKPENILIQESGHIMLVDFDLSKKLIPKSPKSQSSSSSPISHTSKTMAMKDLRKKRFFRFYSCSVQTPSSYEPQASLEFQCPRRSESNSVEKSNSFVGTEEYVAPEVITGKGHNFGVDWWSLGVVLYELLYGMTPFKGENRKETFHRIMTKEPDLTGKMTPLRDLVAKLLEKDRDRRIEVEGIKGHDFFRGVQWDSVLHVARPPYIPLNEVGDTNGFKKNQVETFVHEVFFGKDGEEEKGTKKEENNNDGDDRENNKNVWVEKLSHQSPAENDNFLIF 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0907 439 Pfam Protein kinase domain 28 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0907 439 Pfam Protein kinase domain 251 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0907 439 Gene3D Transferase(Phosphotransferase) domain 1 249 369 - -
Lele40g0907 439 SMART serkin_6 26 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0907 439 Gene3D Transferase(Phosphotransferase) domain 1 120 192 - -
Lele40g0907 439 Gene3D Phosphorylase Kinase; domain 1 25 119 - -
Lele40g0907 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Lele40g0907 439 Gene3D Phosphorylase Kinase; domain 1 370 381 - -
Lele40g0907 439 ProSiteProfiles Protein kinase domain profile. 26 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0907 439 FunFam Serine/threonine-protein kinase OXI1 120 188 - -
Lele40g0907 439 PANTHER FLIPPASE KINASE 1-RELATED 15 376 - -
Lele40g0907 439 SUPERFAMILY Protein kinase-like (PK-like) 27 373 IPR011009 -
Lele40g0907 439 FunFam Serine/threonine-protein kinase OXI1 252 369 - -
Lele40g0907 439 MobiDBLite consensus disorder prediction 397 434 - -
Lele40g0907 439 MobiDBLite consensus disorder prediction 397 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0907 Lele-ChrLele40 19619827 19621355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0907 7 439 AGC Kinase Gene Family AT3G25250 55.455 3.71e-153 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele40g0907 Pkinase 7.6e-32 CL0016