Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0906 ATGTCTTGTCTTTGCCTACTCTACCCATTCATATGCATTTCAACGGGAAACCCTAGCTCGCTTGCCCTTGCCCTTCCCGAGTTCGCAGCGAGACGTGCTGCTTTACCAGAAGCTTTGCTTGCTTCCCTATTAGGCAAAATGGCAGTGCCTTTGATTAGCAAGAAAATTGTTAAGAAGCGCCTCAAGAAGTTCAAGAGGCCTCAAAGTGACAGGAAAATCTCTGTCAAGACAAACTGGCGAAGGCCAAAGGGTATTGATTCCCGTGTGAGGAGAAAGTTTAAAGGATGTACATTGATGCCGAATATCGGTTATGGTTCGGACAAGAAGACCCGCCACTATCTCCCCAATGGTTTCAAGAAATTTGTTGTGCATAATGTCCAGGAGCTTGAGCTCCTGATGATGCACAACAGGACTTACTGTGCTGAGATAGCACACAACGTGTCGACCCGTAAGAGGAAGGAGATGGTCGAACGAGCAGCTCAGTTGGATGTTGTCGTTACCAACAGACTGGCCAGGTTGCGTAGCCAGGAGGACGAGTAA 540 0.4796 MSCLCLLYPFICISTGNPSSLALALPEFAARRAALPEALLASLLGKMAVPLISKKIVKKRLKKFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNVQELELLMMHNRTYCAEIAHNVSTRKRKEMVERAAQLDVVVTNRLARLRSQEDE 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0906 179 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 47 179 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lele40g0906 179 SUPERFAMILY Ribosomal protein L32e 46 177 IPR036351 -
Lele40g0906 179 Pfam Ribosomal protein L32 62 168 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lele40g0906 179 CDD Ribosomal_L32_L32e 64 168 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lele40g0906 179 SMART Ribosomal_L32e_2 61 168 IPR001515 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0906 Lele-ChrLele40 19609649 19612056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0906 47 179 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 86.466 1.16e-85 246