Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0883 ATGGTTAACATTTTCTTAATCTCTCGGCCAACTCGATCAGCCCCAGAAGGTGCTCTCATAACAGAGCTTCCTGGATTTAATGGCACTATACCTTCCAAGCACTATGCCGGTTATGTGACGGTGGATGGAAGTCATGGAAGGAGCCTGTATTATTACTTTGTTGAATCAGAAAGCAATCCATCGGAGGATCCTGTGGTTTTATGGCTTAACGGCGGACCCGGATGCTCTAGCTTCGATGCTTTCGTATACGAGCATGGTCCTTTTAATTTTGAAAAGGCCAAAACAAAGGGATCCTTGCCAACATTACACCTCAATCCTTACAGCTGGTCAAAGGTTTCCAACATTATATATCTGGATTCTCCAGCTGGTGTGGGGTTTTCTTTTTCCAAGAATAAATCTGATTACGCAACTGGAGACATAAAGACTGCTTCAGATACACACATCTTTCTCATTAAGTGGTTTGAACTCTATCCTGAGTTCCTTTCTAACGCATTCTTTATCGCTGGAGAGTCGTATGCTGGAATTTATGTACCTACACTAGCTTATGAAGTAATGAAAGGAATTGATGCCGGTGCAAGGCCCAACCTGAATTTCAAGGGATATTTGGTTGGAAACGGCTGTACAGATGATGAATTTGATGGCAATGCTCTTGTTCCATTTGCACATGGGATGGGTCTTATCTCAGATGAATTATATGAGGAGGTTAGAGTTGAGTGCAATGGGAATTACTATAATCCATTGAATGAAAGTTGTTCAACAAATCTAGCAAAAGTTGATAAGGTGATTGATGGGCTAAACATATATGACATTCTAGAACCATGCTATCATGGGCCGCAGACAGTGGAGGCTACACCATCCTATATCAGGTTGCCGTCCAGTTTCCGGCAGTTAGGTGAGACAGAGAGACCTCTACCTGTGAGAAAAAGGATGTTCGGTCGTGCTTGGCCCCTTAGAGCTCCTGTGAGAGATGGAATTGTGCCAACTTGGCCGCAACTTAGCAATAGCCATAACGTTCCATGCACTGATGACGAGGTCGCAAACTCATGGTTGAACAATGACATAGTCAGGAAAGCAATTCACACTGCAGAGAAATCTGTTGTCAGTATTTGGTATTTATGCACGGACAATATTTTATACTATCATGACGCTGGGAGCATGATCAAGTTCCACAGGAACCTGACATCCAGTGGATATCGAGCACTTATATATAGTGGTGACCATGATATGTGTGTTCCATTCACTGGAAGTCAAGCATGGACTAAATCAATGGGATATAAAGTTGTGGATGAATGGAGGCCCTGGATAGTCAATAATCAAGTTGCGGGTTATACCCAAGGATATGATAAAAATCTCACATTTATGACCATAAAGGGAGCTGGGCACACTGTTCCAGAATATAAGCCACAAGAGTCTTTGTATTTCTATAAGCGCTTTCTGGATGGATTGCCAATATAG 1455 0.4247 MVNIFLISRPTRSAPEGALITELPGFNGTIPSKHYAGYVTVDGSHGRSLYYYFVESESNPSEDPVVLWLNGGPGCSSFDAFVYEHGPFNFEKAKTKGSLPTLHLNPYSWSKVSNIIYLDSPAGVGFSFSKNKSDYATGDIKTASDTHIFLIKWFELYPEFLSNAFFIAGESYAGIYVPTLAYEVMKGIDAGARPNLNFKGYLVGNGCTDDEFDGNALVPFAHGMGLISDELYEEVRVECNGNYYNPLNESCSTNLAKVDKVIDGLNIYDILEPCYHGPQTVEATPSYIRLPSSFRQLGETERPLPVRKRMFGRAWPLRAPVRDGIVPTWPQLSNSHNVPCTDDEVANSWLNNDIVRKAIHTAEKSVVSIWYLCTDNILYYHDAGSMIKFHRNLTSSGYRALIYSGDHDMCVPFTGSQAWTKSMGYKVVDEWRPWIVNNQVAGYTQGYDKNLTFMTIKGAGHTVPEYKPQESLYFYKRFLDGLPI 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0883 484 FunFam Carboxypeptidase 13 297 - -
Lele40g0883 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 451 464 IPR001563 GO:0004185|GO:0006508
Lele40g0883 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 105 117 IPR001563 GO:0004185|GO:0006508
Lele40g0883 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 153 178 IPR001563 GO:0004185|GO:0006508
Lele40g0883 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 128 IPR001563 GO:0004185|GO:0006508
Lele40g0883 484 FunFam Carboxypeptidase 386 481 - -
Lele40g0883 484 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 21 468 IPR001563 GO:0004185|GO:0006508
Lele40g0883 484 ProSitePatterns Serine carboxypeptidases, serine active site. 167 174 IPR018202 GO:0004185
Lele40g0883 484 Gene3D alpha/beta hydrolase 13 305 IPR029058 -
Lele40g0883 484 Pfam Serine carboxypeptidase 24 481 IPR001563 GO:0004185|GO:0006508
Lele40g0883 484 Gene3D - 336 483 - -
Lele40g0883 484 SUPERFAMILY alpha/beta-Hydrolases 20 483 IPR029058 -
Lele40g0883 484 FunFam Carboxypeptidase 339 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0883 Lele-ChrLele40 19424673 19428917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0883 345 484 Calmodulin-binding Proteins AT2G22960 47.857 4.09e-42 146