Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0871 ATGGTTCTGAGTAGCCGAACTTTCTCTGCTCATGTTAGTATTATTAATTTCTTGTTGCTGCTTGGTTGTAGCATGACCTACGGGACTGCTACTGATATCTCCTGCTTGAAAAATATACAAAATTCACTTGAAGACCCATATGGTTATTTGAAGTCTTCATGGGATTTCAACAACAACACAGAAGGATTTATCTGCAGATTCACTGGTGTTGAATGTTGGCACCCTGATGAGAACAAAGTCTTAAATCTAAAGTTGTCAAACATGGGACTCAAGGGCCAGTTTCCTCGTGCCATTCAAAAATGCTCCAGCTTAACAGGATTGGATCTATCAATGAACAAACTCTCTGGAACAATCCCAGCAGATATCAATCATCTTGTTAACTTTGTGACAACTCTTGATCTATCTTCAAATGACTTTTCTGGGACAATCCCTGCAGGTCTTGCACATTGTTCTTATCTTAATTCCCTTAAACTGGATCAAAATCGACTTACCGGGCAAATTCCTGGAGAATTGAGCACGCTTCCAAGGCTAAAGACATTTACTGTCACAAACAATCTTTTGACGGGGCCAATTCCAAACCTTCCGAACATCTCAGCTGTTGGCTATGCAAATAATGCTGGACTATGTGGTAAACCTTTGCCAGTCTGCGAGGCCTCATCCTCCAAGAGTAACTCTGCAGTTATAGTTGGAGCAGCTGTTGGCGGAGTGACAGTTGGATCATTAGTAATAGGTATTGGATTGTTCTTCTTTGTCAGAAGAGTATCTGTAATTAAGAAGGAAGAAGACCCTGAAGGCAACAAATGGGCAAGAAGTCTAAAGGGAACTAAAGGAATAAAGGTGTCAATGTTTGAGAAGTCAGTTTCAAAAATGAAATTGAGCGATCTCATGAAGGCTACTAACAACTTCAGTAAAGGAAATATTATCGGGTCTGGAAGAACCGGAACGGTGTACAAAGCTGCCCTTGATGATGGCACATCACTCATGGTTAAGAGATTGCAACAATCTCAACACTCTGAGAAAGAATTTCTGTCTGAGATGTCTACCCTCGGGGCCGTCAGACATCGTAACCTGGTTCCTCTCTTAGGTTTTTGCGTGGCCAAGAAGGAGAGGCTTTTGGTCTATAGTTTTATGTCAAATGGCACCCTTCATGATCAGCTACATCCTGCTGAAAGTCAGAGCACCCTAGAATGGCCTATAAGGCTTAAAATTGCTATCGGAGCAGCTAAAGGATTAGCATGGCTCCATCATAGCTGCAATCCCCGTATCCTCCATCGTAACATAAGCTCTAAGAGCATCCTATTGGATGCTGATTTTGAGCCCAAAATTTCTGATTTTGGCCTTGCTAGACTGATGAACCCAATTGATACACATTTGAGTACTTTCGTGAATGGGGAGTTTGGGGATTTAGGTTATGTTGCTCCCGAGTACGCGAGAACACTGGTGGCTACACCTAAGGGAGATGTTTATAGCTTCGGAGTTGTTCTTCTTGAGTTGGTGACTGGTGAAAGACCCACCCATGTGGCCAAAGCTCCAGAAACATTCAAGGGAAGTTTGGTTGAATGGATTACCCAACTCTCAAGCAACTCTGAACTGCAGACTGCCATCGATGAATCGTTAGCTGGTAACGAATTCGATCACGAGCTTTTCCAATTTCTGAAGGTTGCATGCAACTGTGTTTCATCAACTGCCAAGGAAAGGCCCACGTTGTTTGAAGTATACCAATTTCTAAGAGCCATTGGGAGTAGGTACAATTTCACAACTGAGGATGAGATATTGGTACCCACAGATATTGGTGATGCTGGAAATCTAGAGGAACTTATTGTGGCTCGCGAATAA 1836 0.4259 MVLSSRTFSAHVSIINFLLLLGCSMTYGTATDISCLKNIQNSLEDPYGYLKSSWDFNNNTEGFICRFTGVECWHPDENKVLNLKLSNMGLKGQFPRAIQKCSSLTGLDLSMNKLSGTIPADINHLVNFVTTLDLSSNDFSGTIPAGLAHCSYLNSLKLDQNRLTGQIPGELSTLPRLKTFTVTNNLLTGPIPNLPNISAVGYANNAGLCGKPLPVCEASSSKSNSAVIVGAAVGGVTVGSLVIGIGLFFFVRRVSVIKKEEDPEGNKWARSLKGTKGIKVSMFEKSVSKMKLSDLMKATNNFSKGNIIGSGRTGTVYKAALDDGTSLMVKRLQQSQHSEKEFLSEMSTLGAVRHRNLVPLLGFCVAKKERLLVYSFMSNGTLHDQLHPAESQSTLEWPIRLKIAIGAAKGLAWLHHSCNPRILHRNISSKSILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGVVLLELVTGERPTHVAKAPETFKGSLVEWITQLSSNSELQTAIDESLAGNEFDHELFQFLKVACNCVSSTAKERPTLFEVYQFLRAIGSRYNFTTEDEILVPTDIGDAGNLEELIVARE 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0871 611 CDD STKc_IRAK 308 576 - -
Lele40g0871 611 SUPERFAMILY L domain-like 30 197 - -
Lele40g0871 611 Gene3D Phosphorylase Kinase; domain 1 263 376 - -
Lele40g0871 611 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Lele40g0871 611 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 57 193 - -
Lele40g0871 611 ProSiteProfiles Protein kinase domain profile. 302 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0871 611 SUPERFAMILY Protein kinase-like (PK-like) 280 576 IPR011009 -
Lele40g0871 611 FunFam Leucine-rich repeat receptor-like protein kinase 377 587 - -
Lele40g0871 611 Gene3D Transferase(Phosphotransferase) domain 1 377 593 - -
Lele40g0871 611 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Lele40g0871 611 Gene3D Ribonuclease Inhibitor 30 217 IPR032675 -
Lele40g0871 611 FunFam Nuclear pore complex protein NUP107 29 193 - -
Lele40g0871 611 Pfam Protein tyrosine and serine/threonine kinase 304 575 IPR001245 GO:0004672|GO:0006468
Lele40g0871 611 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 263 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0871 Lele-ChrLele40 19313751 19316105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0871 24 590 Receptor kinase-like Gene Family AT3G28450 47.140 1.12e-179 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lele40g0871 PK_Tyr_Ser-Thr 3.3e-40 CL0016