Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0869 ATGACTTCATTTTTGAAGCCTGAGAATGCTCTGAAAAGAGCGGAAGAATTGATCAATGTTGGACAGAAGCAGGATGCTTTGCAAACTCTTCATGGCCTTATCACTTCAAAAAGATATAGGGCATGGCAGAAAACACTTGAAAGGATCATGTTTAAATATGTAGAACTCTGTGTAGACATGCGGAAAGGGCGATTTGCAAAGGATGGGCTCATTCAGTATCGAATTATATGTCAGCAAGTTAATGTTAGTTCACTGGAGGAGGTGATCAAACATTTCATGCATCTGTCAACTGAGAAAGCTGAACAAGCTCGCAGCCAGGCACAGGCATTGGAAGAAGCTCTCGATGTTGATGATTTAGAGGCTGATAAAAGGCCGGAGGACTTGATGCTTAGCTATGTGAGTGGGGAGAAAGGAAAAGACAGATCTGACAGGGAGCTTGTTACTCCATGGTTTAAATTTCTTTGGGAAACATACAGGACTGTGCTTGAAATATTACGGAACAATTCAAAACTGGAAGCTCTATATGCTATGACAGCGCATCGGGCTTTTCAATTTTGTAAGCAATATAAGCGAACAACTGAGTTCCGTAGACTTTGTGAAATTATAAGAAACCATCTAGCCAATCTTAATAAATATCGAGACCAACGAGATCGGCCTGATCTTTCAGCGCCTGAAAGCTTGCAACTATATCTAGATACAAGATTTGAGCAACTGAAAGTTGCCACTGAACTTGAACTCTGGCAGGAAGCTTTTAGATCTATTGAAGATATACATGGACTAATGTGCATTGTCAAGAAAACGCCCAAGGCGTCTTTGATGGTTATTTACTATGCTAAGCTGACAGAAATATTTTGGATATCATCGAGCCATCTTTATCATGCATATGCATGGTTCAGGCTCTTTTTGCTGCAGAAGAGCTTCAATAAGAATCTGAGCCAGAAGGATCTGCAATTGATAGCTTCATCTGTTGTTCTGGCTGCACTTTCAGTACCTCCTCATGATCACACTCAAGGTGCATCTCATTTGGAATTGGAGCATGAAAAAGAGAGGAACTTGAGGATGGCCAATCTCATTGGTTTTAACCTTGAAAGTAAACCTGATAGCAGAGAAGTGCTTTCAAGGTCGGCCCTTCTTGCTGAACTGGTGTCCAAGGGTGTAATGTCTTGTGCAACTCAGGAAGTGAAGGACATTTATCATCTTCTCGAACATGAATTTCTTCCCCTAGATCTGCCATCAAAAGTTCAGCCTCTGCTAACCAAAATATCAAAATTAGGGGGTAAGCTCTCTACTGCTTCTTCTGTCCCTGAGGTGCAGCTGTCTCAGTATGGCCCAGCACTGGAGAAACTAGCTACCTTGAGGTTGCTACAGCAGGTGTCCAGTGTATACCAGACAATGAAGATTGAGACCTTATTGGGAATGATCCCCTTTTTTGATTTTTCTGTAGTGGAAAAGATTTCTGTGGATGCTGCTAAGCATAACTTTGTATCGATGAAAGTTGACCACACGAGGAATGTTGTAGTTTTCTGCAAGACGAGTCTTGAGTCTGATGGCTTAAGGGATCATCTGGCTAATTTTGCTGAATTTCTGAATAAGGCAAGACAAATGATTTACCCTCCTGATGGGAAGCCTTCAAAACTTGGACCTTTGCTTCCCACTTTGAATGAGGTTGTGGCCAAGGAACACAAGAGGCTTCTTGCACGGAAATCAATTATTGAGAAGCGAAAAGAAGAACAAGAACGGCAGCTTCTTGAAATGGAAAGAGAAGAGGAATCGAAGAGATTAAGACTGCAGAAAATAACGGAAGAAGCAGAACAAAGAAGACTTGCCAATGAGTATGAGCAGAGGAAGAACCAGAGAATTCTCAGAGAAATAGAAGAAAGAGAAATGGAAGAAGCTCAGGCATTGCTTCAGGAAGCTGAGAAGCGCATTAAAAAGAAGGGGAAAAAGCCAATAATAGAGGGTGAAAAACTGACCAAGCAAACACTGATGGAGCTGACTTTGACTGAACAACTCCGCGAAAGGCAAGAAATGGAAAAGAAACTACAAAAACTTGCTAAAACGATGGACTATTTGGAAAGAGCCAAAAGAGAGGAGGCTGCTCCCTTGATTGAAGGTGCATATCAAAAGCGCCTAGTTGAAGAAAAGCTTCTTCATGAGCGTGAGCAACAGCTTGAGATTGAAGTTAGCAAACAGTGCCATGAGGGAGATCTCGAGGAGAAGGAAAGACTGGCACGTATGGTTGGCAATAAAGAGATTTATCAGGAGAGAGTTGTCAGTCGTCGCCAGGCAGAATTTAATAGATTGAGGCGGGAAAGAGAGGAGCGAATCTCAAGGATTTTACAGTCCAGAAGACAAGAGAGGGTACAGATGAGGAAGTTTAAGTATTATCTGAGGTTAGAAGAGGAGAGACAGCAAAAATTGCGCGAAGAGGAGGAAGCTCGGAAGCGTGAAGAGGCTGAGAGGCGGAAGAAGGAAGAGGCTGAGCACTTGGCAAAATTGGCTGAGATAGCAGAAAAGCAGAGGCAAAGAGAGCGGGAACTCGAAGAGAAGGCAGAGAGGCAGAAGAAAGAAGCACTGTTTGGCAGAAGTGGCGAGGTAGCTGTGAAGCCTCTTGAACCTTCAGCCCGCCCACTAGAGGCTGGTCCTACCTCTGCCACTCCTGCAGCAGCTCCTGCCGCTGCTGCCCCAACCCCTGGGAAATATGTCCCTCGGTTCCGGCGTGAGAAAACTGAAGCCCCAAGCCCTACCCCGCCTCCAGAAACTGATCGATGGACAAACTCCAGCAGGCAGGATGGGGACAGATGGCGTACCGATGATCGAAGACCTGCTTTTGGTGCTGGTGGGGGTTCGCGGTCATCATCAACATGGTCCTCATCCAGGCGTGGATCTGATCGTTGA 2898 0.4444 MTSFLKPENALKRAEELINVGQKQDALQTLHGLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVATELELWQEAFRSIEDIHGLMCIVKKTPKASLMVIYYAKLTEIFWISSSHLYHAYAWFRLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDHTQGASHLELEHEKERNLRMANLIGFNLESKPDSREVLSRSALLAELVSKGVMSCATQEVKDIYHLLEHEFLPLDLPSKVQPLLTKISKLGGKLSTASSVPEVQLSQYGPALEKLATLRLLQQVSSVYQTMKIETLLGMIPFFDFSVVEKISVDAAKHNFVSMKVDHTRNVVVFCKTSLESDGLRDHLANFAEFLNKARQMIYPPDGKPSKLGPLLPTLNEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRLQKITEEAEQRRLANEYEQRKNQRILREIEEREMEEAQALLQEAEKRIKKKGKKPIIEGEKLTKQTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEGAYQKRLVEEKLLHEREQQLEIEVSKQCHEGDLEEKERLARMVGNKEIYQERVVSRRQAEFNRLRREREERISRILQSRRQERVQMRKFKYYLRLEEERQQKLREEEEARKREEAERRKKEEAEHLAKLAEIAEKQRQRERELEEKAERQKKEALFGRSGEVAVKPLEPSARPLEAGPTSATPAAAPAAAAPTPGKYVPRFRREKTEAPSPTPPPETDRWTNSSRQDGDRWRTDDRRPAFGAGGGSRSSSTWSSSRRGSDR 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0869 965 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Lele40g0869 965 Coils Coil 93 120 - -
Lele40g0869 965 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 953 IPR027512 GO:0005852
Lele40g0869 965 Coils Coil 667 697 - -
Lele40g0869 965 MobiDBLite consensus disorder prediction 926 941 - -
Lele40g0869 965 Coils Coil 615 649 - -
Lele40g0869 965 Pfam PCI domain 373 508 IPR000717 -
Lele40g0869 965 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Lele40g0869 965 Gene3D - 354 493 - -
Lele40g0869 965 Gene3D - 268 342 - -
Lele40g0869 965 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 965 IPR027512 GO:0005852
Lele40g0869 965 Coils Coil 561 602 - -
Lele40g0869 965 MobiDBLite consensus disorder prediction 806 965 - -
Lele40g0869 965 MobiDBLite consensus disorder prediction 948 965 - -
Lele40g0869 965 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Lele40g0869 965 MobiDBLite consensus disorder prediction 806 862 - -
Lele40g0869 965 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Lele40g0869 965 Gene3D UVR domain 217 267 - -
Lele40g0869 965 Coils Coil 796 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0869 Lele-ChrLele40 19302860 19308143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0869 1 964 Eukaryotic Initiation Factors Gene Family AT4G11420 71.939 0.0 1322