Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0862 ATGGCGAGGTTGAGCTGCAGAGACAGAGATTGTGCTTTTTATGGTTATTCCAAGATAGCTTTGCTTCTTTTGGCTCTGCTGTTAAGGATTTGGTCTCAACCTGTGTCTTGTCGTTCAACTATAGAGTTTCTTCCCGGCTTCCATGGACGCCTTCCCTTCCAACTTGAAACTGGGTACGTGGGAGAGGGTGAATCAGAAGAAGTACAAGTTTTCTATTATTTTATTAAGTCAGAGAATAATCCTCAGGATGATCCTCTCCTTCTTTGGCTAACTGGGGGTCCTGGTTGCTCTTCCTTTGTGGCATTTGTTGATGAAATAGGTCCACTCGCATTTCTAAACCAGGAGTACAATGGGAGCTTGCCGAGCTTAGTGTTGAGGCCTCAGTCATGGACAAAGGTAAGCAATATAATTTTCCCAGATTTGCCCGTTGGAACAGGCTTCACATACGCCAAAACAGAAGTTGCTTATAAGCAATCAAGCGATTGGGGTCTAGTGCATCACGCTTATCAGTTTTTAAGGAAGTGGCTAATGGATCATGCAGAATACCTATCAAATAAAGTGTATTTGGGTGGTGACTCCTATTCGGGCATTACCATCCCAGCCCTATTTCAAGAAATTTCTTATGAACAGTCATTACAGAAGAACTGTAATGGAGAATACACAAACATAGACCCCAAAAACTTGTTGTGTCTCAGAGATTTCCAGTTATTCGAAGAGTTAACTGCAGAAATCGATAGCGCTATGATTTTGGAACCTGCCTTTTGTGGTTATACTCTGCATGTGCCTCCCCAAATAACTTCTTTGATGAAGAGATCTCTAACCCAGAAAGTGAAGGCCCATAATTTTCCATCCAAATGTCGGCTATTAGGATATTTACAAACTGCTCATTGGGCCAATAATGACCATGTTTGCAAAGCACTCCATGTTCGAAAGGGGACAATAGGACATTGGAAGCGTTGTAAGACTATTACACCTTACAAGCAGTACATAGATAGTAGCTTTCATATTCATGCAAATCTCAGTACAATGGGTTATCGTTCTTTGATATACAGTGGTGATCATGATATGGTATGTCCTTTCTCATCAACACAAGCATGGATTAGATCTTTGAATTACTCCATCCTTGATGACTGGAGGCCTTGGTATGTCACTGCTGGCCAAGTTGCTGGGTACACAAGGACTTACTCCAATGGCATGACCTATGCAACTGTCAAGGGTGCTGGACATACAGCTCCAGAATTCAAACCTGAAGAATGTCTTGCTATGTTCAAGAGATGGATATCGAATGAGCCTCTCTAG 1299 0.4211 MARLSCRDRDCAFYGYSKIALLLLALLLRIWSQPVSCRSTIEFLPGFHGRLPFQLETGYVGEGESEEVQVFYYFIKSENNPQDDPLLLWLTGGPGCSSFVAFVDEIGPLAFLNQEYNGSLPSLVLRPQSWTKVSNIIFPDLPVGTGFTYAKTEVAYKQSSDWGLVHHAYQFLRKWLMDHAEYLSNKVYLGGDSYSGITIPALFQEISYEQSLQKNCNGEYTNIDPKNLLCLRDFQLFEELTAEIDSAMILEPAFCGYTLHVPPQITSLMKRSLTQKVKAHNFPSKCRLLGYLQTAHWANNDHVCKALHVRKGTIGHWKRCKTITPYKQYIDSSFHIHANLSTMGYRSLIYSGDHDMVCPFSSTQAWIRSLNYSILDDWRPWYVTAGQVAGYTRTYSNGMTYATVKGAGHTAPEFKPEECLAMFKRWISNEPL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0862 432 Pfam Serine carboxypeptidase 45 215 IPR001563 GO:0004185|GO:0006508
Lele40g0862 432 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 210 416 IPR001563 GO:0004185|GO:0006508
Lele40g0862 432 Gene3D - 289 432 - -
Lele40g0862 432 FunFam Carboxypeptidase 334 429 - -
Lele40g0862 432 Gene3D alpha/beta hydrolase 36 250 IPR029058 -
Lele40g0862 432 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Lele40g0862 432 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 200 IPR001563 GO:0004185|GO:0006508
Lele40g0862 432 PRINTS Carboxypeptidase C serine protease (S10) family signature 399 412 IPR001563 GO:0004185|GO:0006508
Lele40g0862 432 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Lele40g0862 432 FunFam Carboxypeptidase 285 431 - -
Lele40g0862 432 SUPERFAMILY alpha/beta-Hydrolases 41 431 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0862 Lele-ChrLele40 19197077 19204482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0862 290 432 Calmodulin-binding Proteins AT2G22960 59.722 1.08e-53 176