Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0848 ATGTCATCTCCAAACGCAACGCTTCGTCATGCCGCTTCAGCTTGTTCTGAAACAAAGCTCTCCCCCAAATCTCACGTGATCTCACCCGCATCATCACGTGCCACTATACCTTCTTCCTCAATGGCTTCATCTTCTTCATCAAACCCTACTGTAACGAAGGTTAAACTCAGAAGAAAAGGCATTAATCTTCGAGCATGTGGTCATGAGATAAACAAGTACGAGCCGTCGTCTCCGTATTACAAGGATCTCCTTTACAAACCTATCGATATTAACAACGAATATGGTTCTCAGAATCATCATCATCACCAGAACAATCTGAATAGTGGCGGTGGCCATAATAATAATAGTAATTCTAGGGTTCCGCCGACGGGTACGGCTTCTGAACCTCCGCACTACAAAGGGCTTACAGATTTTTCACTGGATATTGATCATGGAGGACAACACCTACGATCGCATCATGACGATGGTTGGAGAAATATTTATGAGGTTGAAGGAGCGTACGAGTGTAGTCCATATTTCAGAGGCCTCATCACTGATAGCTCTTTAGCAATGGCGATTCGTAAACTTGAGGAAGGAGGAGGACGAGGTGTTGTGCCAACAGGCTTCTCATTCTTTGGGTTTAACATGAACTTAGGTTTATGCTTAGGTGGTAAGGATGAGAGGACGGATTTCAAAAGACAGCATACTTTATCGGCGCCACCAGCACCGATACAATTATTGTCGCTGCCGCGGCCACCACAGCCACCACCACTGATGTCTATGTTTCCATCCAAAGGTATGAATGCTTTAAGCATGGAGCTGAAAGTAGAAGATGGTGAGAAGCCTTTGGGGGAGAGAGAATCCGAAGAAACTGAAGAGGAAAAAGCTGTGGATATTACTGAGAATATTAAGGAGGAGGCCATGAATGAATCTGCTGGTTTGCCAAATGATGAGGAGATAAAAGAGGGATGTGTTTGTGATCATTTTATATTTGAAGGACCACCTGGTGTTGGAAAGAGAACCATGATACGAGCTCTACTTCGAGAGGTCTTTGGCCATGACCAAGTCAAGGTGACTGAGGAATATAAAAGATTCTTATTAAAGGCCGAGACACTATCAAGAGAATGGTTGTTGTACATAAAGTGGATGCTGGAAAGTTATAATAAAGGTCGAAATAAAGTCTTCTTTTGCTGCTCTGATGAATCCAAGCTCCAAACTGTTAAACCTATTTGCAAAACTTTTCGTCTTTCTCCACCTTCAGCTCGAGAGTGTTTGACGAAGTTGAGAATATTGTGTTCTTCAAGTAAACAGATTGTTGAGGTTTTGGAATACATAGGGAAAGAAGAAGGGAAAGAATTGTCCCTACAATTTCTTACAAAGGTTGTTGAGAAGTCAAAGAACAATCTTCGGCAGGCCACTCGCTCTTTGGAGGCAACTTTCCATAACAAGGATTCAATCAAAGAAGATGATTCAATTTTAACAGGATGGGAAGATGACATCTCAAATATTGCAAAGAATATACTCAAAGAGCAAAGTTCAAAACAGTTATACATGATTCATGTGAAGCTTCAGAGTCTTATGATTCACAAGGTTTCGCCTGACTTTGTTTACAAGAAAGTTCATGGAATTAAGATGAGAAGTGGGAAGCATTCTGGTCATGCTCACAACAAAGAAAGAGAATATGAAGAAAAGAACAACGAAATAACAAAGAAGATTAATGCTCGAAGTTACTCTGAAGTTGAAGAATTCATAGCAAAACTCATGAGTTGGTACAAGACCTCCATCTGCAAAAGTGATCATACGTAA 1785 0.4118 MSSPNATLRHAASACSETKLSPKSHVISPASSRATIPSSSMASSSSSNPTVTKVKLRRKGINLRACGHEINKYEPSSPYYKDLLYKPIDINNEYGSQNHHHHQNNLNSGGGHNNNSNSRVPPTGTASEPPHYKGLTDFSLDIDHGGQHLRSHHDDGWRNIYEVEGAYECSPYFRGLITDSSLAMAIRKLEEGGGRGVVPTGFSFFGFNMNLGLCLGGKDERTDFKRQHTLSAPPAPIQLLSLPRPPQPPPLMSMFPSKGMNALSMELKVEDGEKPLGERESEETEEEKAVDITENIKEEAMNESAGLPNDEEIKEGCVCDHFIFEGPPGVGKRTMIRALLREVFGHDQVKVTEEYKRFLLKAETLSREWLLYIKWMLESYNKGRNKVFFCCSDESKLQTVKPICKTFRLSPPSARECLTKLRILCSSSKQIVEVLEYIGKEEGKELSLQFLTKVVEKSKNNLRQATRSLEATFHNKDSIKEDDSILTGWEDDISNIAKNILKEQSSKQLYMIHVKLQSLMIHKVSPDFVYKKVHGIKMRSGKHSGHAHNKEREYEEKNNEITKKINARSYSEVEEFIAKLMSWYKTSICKSDHT 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0848 594 Coils Coil 547 567 - -
Lele40g0848 594 Gene3D - 427 487 - -
Lele40g0848 594 MobiDBLite consensus disorder prediction 94 137 - -
Lele40g0848 594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 320 483 IPR027417 -
Lele40g0848 594 Coils Coil 448 468 - -
Lele40g0848 594 MobiDBLite consensus disorder prediction 1 53 - -
Lele40g0848 594 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 358 565 - -
Lele40g0848 594 MobiDBLite consensus disorder prediction 94 124 - -
Lele40g0848 594 Gene3D - 292 370 IPR027417 -
Lele40g0848 594 Gene3D - 488 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0848 Lele-ChrLele40 19046855 19054066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0848 329 585 Core DNA Replication Machinery Family AT5G27740 25.651 7.14e-17 80.5