Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0845 ATGAGTGGAGGTGGGGAAGAAGAGACGAGCTTAGAGCACACTCCCACATGGGTTGTTGCTCTTGTTTGCACTGTCATCGTCGCCGTTTCACTCGCTGTTGAACGTTTTCTTCATTATGGCGGCAAGTTCCTCAAGAAGAGAGATCAGAAACCACTCTATGAAGCTCTTCAGAAAATCAAAGAATAGTTGATGCTGTTGGGTTTTATATCGCTGCTTCTGACGGTTACACAGAATGGGATTACCAAAATCTGCGTTCCGGCGGGATTGACCCGCCATATGCTTCCTTGTGACCAGAATGAAGGAGAAGGCGAAGAATCGGAGACATCCCATTTTCAGAGCTTCTTCTCTTTCCCTCACATTTCTGGAACTACTCGTCGTCTTCTTTCTGGGTCGTCATCTAGTAGCTATTGTGCTCGTAAGAACAAGGTTCCATTATTATCTTCAGAAGCCATTGAGCACCTGCATATCTTTATATTTGTTCTAGCTGTGGTCCATGTAACCTATTGTGTTCTGACTGTTTTCTTCGGAGGATTGAAAATACGTCTGTGGAAACACTGGGAGGACTCAATTGCTAAAGACAACTATGACACACAGAAAGTTCTGGAACCAAAGATCACTCATGTTCAACAGCATGCTTTTATTAAGGGTCGTTTTCTGGGCTTTGGTAAAGACTCTGCTCTGATGGGTTGGTTGCACTCTTTTTTCAAGCAATTCTATGGCTCTGTGACTAAATCGGATTATATGACCTTACGTCATGGTTTTATCATGACTCACTGCAAGTCAAATCCGAAGTTTAACTTCCACAAATACATGATAAGGGCCCTTGAAGATGATTTTAAACAAGTTGTTGGTATAAGTTGGTACCTTTGGATCTTTGTAGTCATCTTTTTGTTGCTTAATGTTAATGGTTGGCATACATATTTTTGGATAGCGTTTATTCCTTTTTTTCTTCTACTAGCTGTGGGCACTAAGTTGGAGCATGTAATAATACAATTAGCTCATGAAGTAGCTGAAAAGCATGCGGCCATAGAAGGTGAATTGGTTGTTCAACCATCAGATGATCACTTTTGGTTTAGTCGCCCTCACTTCGTGCTCTTCTTGATTCACTTCATCCTTTTCCAGAATTCTTTTGAGATAGCTTTCTTTTTCTGGATATTGGTTACCTATGGCTTTGACTCCTGCATAATGGGACAAGTCTGTTACATTGTCCCCAGGCTTGTTATCGGGGTATTCATTCAGGTCCTTTGCAGCTACAGCACGCTACCTCTGTATGCGCTCGTCACGCAGATGGGAACTCACTTCAAGAAGGCAATATTTGATGAGCATGTGCAAGTGGGGCTTGTTGGTTGGGCACAGAGGGCAAAGAATAAGAAAGAACACAAAAGTGATCATCCTGGCCAAGGAAGTTCTCATGATGGCTCTTCCACTGTGGGAGTCCAAATGGCTTCCATTTTCAAAAGAGCATCTGCCCCAGAAGGCAATCCTCCTCCCCCAAAACCTGAGGGCTCTGATAAGAATTCATTTTCCTCGAGTCCATACGGTAGCAAGCTTCTAACTTCCGGAGTTCCCACTATCTGGTTCCCTTTCTCTTCTCTACAGAGCGCGAAAAAATTCGATGGTTTACCTCTAGATTTCAAGATTCCAGAGTTACAATCAATCATGTCGACCTTATCAATTTCTTCATCGGTTTCTACTTCTTTATTTTCTCCCCGCAATGCCACTTCTACTTCGTACTTAACATGCTCTCTCAAAATTTCGCCTTGCCAAATCAAAAACCCATTGCTGAAATTGCAAGAACCGCTCCATTCGAAACTGTATGCAGCGACTAAAGAAGGCAAAAGACCAGGGAGAGGTGTGGTGGTTATGAGCATGGAGGCTGGTGTAGGATTCATGGGCACAAAATTAGGGATGATGAGTTATTTTGAACCCGACGGCGAGGTCGTTCCGGTGACTGTGGTTGGTTTTAAAGAAGGGAATATTGTGACTCAGATTAAGACTGAGGCTACTGATGGCTACAATGCGGTTCAATTGGGATATGAAAGGGTGAGGGATCGAAAACTGACGAAACCAGAGATGGGTCATCTTGAGAAGGTGGGTGCTATACCCATGAGGCATCTTCAGGAGTTTCGTCTTCAATCTGTGGAAGGGTTCGAGCCTAATCAGCGACTTGTGTTGGATGAGATTTTCAAGGAGGGGGATCTTGTTGATGTCTCTGGCATCACCATTGGCAAGGGGTTCCAAGGTGGGATCAAGCGTCACAACTTCAAAAGGGGTCCGATGACCCATGGTTCAAAGAGTCACAGACAGCTAGGATCAATCGGTGCAGGAACGACACCTGGCCGTGTGTACAAGGGGAAGAAGATGCCTGGGAGGATGGGAGGAACAAAGACGAAGATCAGAAAGCTAAAGATTGTGAAGATTGATAAAGATCTTAATGTCGTCTTGATCAAAGGTGCTCTCCCTGGTAAGCCTGGAAATCTCATGAGGATTGCTCCTGCCAAGATTGTGGGCAAGAACATTCCCAAGAATTAG 2532 0.4412 MSGGGEEETSLEHTPTWVVALVCTVIVAVSLAVERFLHYGGKFLKKRDQKPLYEALQKIKEXLMLLGFISLLLTVTQNGITKICVPAGLTRHMLPCDQNEGEGEESETSHFQSFFSFPHISGTTRRLLSGSSSSSYCARKNKVPLLSSEAIEHLHIFIFVLAVVHVTYCVLTVFFGGLKIRLWKHWEDSIAKDNYDTQKVLEPKITHVQQHAFIKGRFLGFGKDSALMGWLHSFFKQFYGSVTKSDYMTLRHGFIMTHCKSNPKFNFHKYMIRALEDDFKQVVGISWYLWIFVVIFLLLNVNGWHTYFWIAFIPFFLLLAVGTKLEHVIIQLAHEVAEKHAAIEGELVVQPSDDHFWFSRPHFVLFLIHFILFQNSFEIAFFFWILVTYGFDSCIMGQVCYIVPRLVIGVFIQVLCSYSTLPLYALVTQMGTHFKKAIFDEHVQVGLVGWAQRAKNKKEHKSDHPGQGSSHDGSSTVGVQMASIFKRASAPEGNPPPPKPEGSDKNSFSSSPYGSKLLTSGVPTIWFPFSSLQSAKKFDGLPLDFKIPELQSIMSTLSISSSVSTSLFSPRNATSTSYLTCSLKISPCQIKNPLLKLQEPLHSKLYAATKEGKRPGRGVVVMSMEAGVGFMGTKLGMMSYFEPDGEVVPVTVVGFKEGNIVTQIKTEATDGYNAVQLGYERVRDRKLTKPEMGHLEKVGAIPMRHLQEFRLQSVEGFEPNQRLVLDEIFKEGDLVDVSGITIGKGFQGGIKRHNFKRGPMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDKDLNVVLIKGALPGKPGNLMRIAPAKIVGKNIPKN 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0845 843 FunFam 50S ribosomal protein L3, chloroplastic 755 835 - -
Lele40g0845 843 TIGRFAM L3_bact: 50S ribosomal protein uL3 629 830 IPR019927 GO:0003735|GO:0005840|GO:0006412
Lele40g0845 843 MobiDBLite consensus disorder prediction 456 476 - -
Lele40g0845 843 Gene3D Translation factors 756 835 - -
Lele40g0845 843 Gene3D - 660 719 - -
Lele40g0845 843 MobiDBLite consensus disorder prediction 756 794 - -
Lele40g0845 843 ProSitePatterns Ribosomal protein L3 signature. 729 752 IPR019926 -
Lele40g0845 843 PANTHER MLO-LIKE PROTEIN 1 7 486 IPR004326 GO:0006952|GO:0016020
Lele40g0845 843 SUPERFAMILY Translation proteins 628 839 IPR009000 -
Lele40g0845 843 FunFam 50S ribosomal protein L3 659 723 - -
Lele40g0845 843 Pfam Mlo family 9 469 IPR004326 GO:0006952|GO:0016020
Lele40g0845 843 MobiDBLite consensus disorder prediction 488 512 - -
Lele40g0845 843 Hamap 50S ribosomal protein L3 [rplC]. 627 834 IPR019927 GO:0003735|GO:0005840|GO:0006412
Lele40g0845 843 Pfam Ribosomal protein L3 723 809 IPR000597 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0845 Lele-ChrLele40 18914750 18927815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0845 3 478 MLO family AT4G02600 70.393 0.0 684