Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0827 ATGGCTGGCGGAGGTTTCTTTGAAGGCGGCGGCCTGGATGATTTTGAAGGCAAGATCAATGTGCTCCTAATTACTTCATCCATAATGGCCTCCATTGAAGGGTTCGTGTTTGGATACGATTCAGTGAGTAAGCATGGTTTCGAATTCCGACCTGCATACAGAGCGAGAACAAGCATGCATTCGAGCGAGTTCGACGGCGCCGCAGCCTTCTCCGGCGGTGGTTTTATGCCTTCTCTGGCAACTCAAGGCCATGAACCTTCCTTCTCCTACTCCAAGAATCGTGACGCTCAGTCATTGCTTCCTCTGACAGTCAAGCAGATAAATGATGCATTTCAGTCAATTGATGATAAGTCTAATATGATTATCGATGGCGTGGATGTTAATAATGTCACTCTTGTAGGAAAGGTGTGCAACAAAGCTGGAAGGATTACTGATGTTACTTTTGTACTAGATGATGGGACCGGAAGGATTGAGTGTAGTAAATGGCTCCAGGAAGACGTAGACACCAATGAAGCAGAGGGTATCAGGGATGGAATGTATGTGCGCTTACATGGACACTTGAAAGGTTTTCAGGGAAAAAGGACCTTAAATGTATTCTCTTTTAGGCCTTTGAACGACTTTAATGAGATTGCAAGTCACTTCATTGATTGTATATACGTCCATCTCTACAATACCAGGATACGGAGTAGTGTGCCAAATCAGCAATCAATGAACAATTCCTTACCTATTAATCCCACAAGAGGTTATCAAGCTGCCCCTCCAAATCAATTCTCTGGTCAGCCCAACAATGGTCAGAAGAGTGTTGAAGATATGGTCTTAGATATCTTGCATCTTCCCTCGAACAGGGCAAAAGAGGAGGGTGTCTCTCGGGATCTTATTGCACAGCATCTTGGAATTCCCTTGGATAAGCTCATGTTATCCATACAAAATCTTATTGAGGAAGGCACCATTTATGAAGCTATAAATGATCATTACAAGTCAATTATCGATGGTTGA 996 0.4347 MAGGGFFEGGGLDDFEGKINVLLITSSIMASIEGFVFGYDSVSKHGFEFRPAYRARTSMHSSEFDGAAAFSGGGFMPSLATQGHEPSFSYSKNRDAQSLLPLTVKQINDAFQSIDDKSNMIIDGVDVNNVTLVGKVCNKAGRITDVTFVLDDGTGRIECSKWLQEDVDTNEAEGIRDGMYVRLHGHLKGFQGKRTLNVFSFRPLNDFNEIASHFIDCIYVHLYNTRIRSSVPNQQSMNNSLPINPTRGYQAAPPNQFSGQPNNGQKSVEDMVLDILHLPSNRAKEEGVSRDLIAQHLGIPLDKLMLSIQNLIEEGTIYEAINDHYKSIIDG 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0827 331 FunFam replication protein A 32 kDa subunit A-like 92 226 - -
Lele40g0827 331 Pfam OB-fold nucleic acid binding domain 130 202 IPR004365 GO:0003676
Lele40g0827 331 PANTHER REPLICATION PROTEIN A-RELATED 63 328 IPR040260 -
Lele40g0827 331 CDD RPA2_DBD_D 129 222 - -
Lele40g0827 331 Gene3D - 91 226 IPR012340 -
Lele40g0827 331 SUPERFAMILY Nucleic acid-binding proteins 99 226 IPR012340 -
Lele40g0827 331 Gene3D - 261 329 IPR036388 -
Lele40g0827 331 MobiDBLite consensus disorder prediction 234 264 - -
Lele40g0827 331 Pfam Replication protein A C terminal 221 323 IPR014892 -
Lele40g0827 331 SUPERFAMILY "Winged helix" DNA-binding domain 263 327 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0827 Lele-ChrLele40 18721838 18728136 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0827 61 328 Core DNA Replication Machinery Family AT2G24490 45.255 6.09e-77 235