Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0826 ATGTCTCATTTCGCTTCTTCACCATCTAATTCGGGATTCACTTTTGAGTACGACATATTCTTAACTATCAGCCATCCCAAACATCATGTGAGAACCAACTTGGAGAAGGACTTGAGAGATGTTGGAATCAAAGCTTTGATTGATGATCCGATACAGGAGTTTCTCATGTACGAGATAGTAAAGTGCAGAATGGTTGTGGTTGTTTTCACACCAGAATTCCTTGAGTCCGACATATTTCTCAACAGACTTGTGAATATAAGACGGTGTCAAAAACTTGCGCATATAAAAGTGTCGCCTGTATTCTGTGGATTAAGCGAGGAGCAAGTACGTGAGCAGTTGGAGGGTGTGGATCGGAGAAGATTAGATAATTGGGATTTCGATTTCGATTTCGATTTGGACTCAGGAGGATTCATCGCTGAGGCTGCTTCGCTTTTGGACTCAGCAAGGGCCATCGCTGAGGCTGCTTTGTTATCTGATTTGGGGGCATTACCGGAGTGGCAAGGTGTATTGCTTGAATTGGATCAAATTTCTTATGGTCAAATGCAAAGAAAGCTCTACGTTAGCATTGAATTTCTAACCGATTTAGAGAAAGATTTGTTCTTTGCTATAGCTTGTTTTTATGTGGGTCAGAGTAAAAGCTATGTTACAGAGTTGTTAAAAGGCTCAAGACTTCCTGTGGAAGTGGTTATGCCTGTAATCTTGGAGCGTAACCTTGTAAAGATCATAAATGACAACCTTTATGTTCATGATTTGCTGCAAGAGACAGTAAGAAATAGCATGGCATCTGTGTATCCCATTGGCGTTATGATAAAGAATTTCACCAAACATACCATGGATTTCTACAAGCGAGATGCTGGAACCACTTTTACGGATAAAGAATGGCAGAACATAACATCTAATCTGGAGCCTGGAGATGACATGAAAGTTAAAGTTGAATTTGCACATAAATATACTTCCTTTCAATCATGTGATATCTGGTCTTTGTGTGATGAGAACTCAGAAGCACTGGAACGAGTTTTCATGTGGGACTTTTAA 1035 0.401 MSHFASSPSNSGFTFEYDIFLTISHPKHHVRTNLEKDLRDVGIKALIDDPIQEFLMYEIVKCRMVVVVFTPEFLESDIFLNRLVNIRRCQKLAHIKVSPVFCGLSEEQVREQLEGVDRRRLDNWDFDFDFDLDSGGFIAEAASLLDSARAIAEAALLSDLGALPEWQGVLLELDQISYGQMQRKLYVSIEFLTDLEKDLFFAIACFYVGQSKSYVTELLKGSRLPVEVVMPVILERNLVKIINDNLYVHDLLQETVRNSMASVYPIGVMIKNFTKHTMDFYKRDAGTTFTDKEWQNITSNLEPGDDMKVKVEFAHKYTSFQSCDIWSLCDENSEALERVFMWDF 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0826 344 Gene3D - 13 159 IPR035897 -
Lele40g0826 344 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 115 IPR035897 -
Lele40g0826 344 Pfam TIR domain 17 113 IPR000157 GO:0007165
Lele40g0826 344 ProSiteProfiles TIR domain profile. 15 144 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0826 Lele-ChrLele40 18705802 18714066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0826 164 257 WRKY Transcription Factor Family AT5G45050 31.915 1.42e-08 54.7