Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0825 ATGGCTGCTTCTCCTTCTTCTCCTTTACCATCATCAAGCCCCATTAATCCTTTATCAGCATCGTCATCATCATCATCATCATCATCAGCAAACGAAGAACGCCATTACGACGTGTTCTTGACTTACAAAACTAAATGTGAAACCATAGTTTCTCTTGAAACCTCTTTAAGGGATGCTTCAATAAGAACATACATGGACCACGATGGGCCAATCTCATCAACCTTGAAGAACGCCATAGAGCTGTCAAGAATAGTTATCTTCGTCTTTACCAAACACTTCGCATCGTCTGAAAATTGCTTGAATAAACTCGACATAATCATAAATTGTCACAAAGATATGGGTAAGAAAGTGTTGCCTATATTGTGTGGTGTGAGTCTTTCAGATATACGTCAAGAGATTGGTAGTATTGCAGAATTAATGAGCAGAGGAGATTTGCAGAATAAACAAGATTTTTTCAGATGGAGAAGTGCCTTTACTGAAGCTACTTCGCTTTCCAGATGTACAATCTCAACCAAGTGTTCCAGATATGGCAGAAGAATCAGAGATATCACTCACTCCATTAAAATATTTCTTGATGCAACATACTTGGAAATCCCACCACATCTGGTACCAATACAGCGTCGGGTGAAAGAAGTGCTTCACTTGTCCAAATACTACTCAAATGACATAGCTGTAAGAGAAGAAAAAGTGATCTTAGTAGGCATATGTGGGGTTGTAGGCATTGGCAAATCAACCATTGCTAGAATGATTTATGATACAATCAGTGTCAATTTTGAGAGCGGAAGCTTCCTTGCAAGTATCAAGAAAATGTGGGACAAAGACAACGGTCAAGTTCTTCTCCAAGAACAACTTATTTCAGATATCACTGGCAAAATAGACTTGAAGATACATGATACTGAAACAGGAATCAAACAAATAAAAATAGCTCTAGAGAATAGAAGAGCACTTGTAGTACTTGATGATGTTGACCAAATAGACCAACTTGTGAAATTGTGTGGAAGCAGAGAATGGTTTGGTTTTGGGAGTATGATTCTCATCACTTCAAGAAGTAAACATATGTTTGACCAACTTATAAAAGTCAAATATGTGTACGAGGTAAAGAAAATGGATAAAAGGGAATCTCTTGAACTTCTGAGTTGGCATGCTTTCAAGTTGAGTTGGGATGCTTTCAAGCAAACTAGTCCAAGCAATGATTTCATTAATCTTGCAAAAAATGTCATTGTTCATTGTGAAGGATTACCTCTAGTTCTTGAAGTTCTTGGCTCTCTTTTGTATAGAAAGACAACACAAGAGTGGGAATGTGTATTGAAGAAACTGAAAACCATCCCTTCAAGTCAAATTCAAGAGAAGATGAAAATAAGTTGTGAGCATTTAGATGACTCAGTTAAAGATTTATTCTTTAATATTGCATATTTTTATGCAGGTAATGAGAAATTGTCTGTTACACAAAACCTAATAAGTGGTGGTGGCTTTCAATTTCCAGTTGAGATTGGAATAAAAACGCTCGTTGAACTGAGCCTGATAAAAGTTGACATGAATAGTAGGGTTCATATGCATGAATTGCTTCAAGAGATTGGGAAGGGAATAAACCCTAACAAGATAAAACCCAAGTATAACTATCATGTGTTCTTGAGTTTCAGTGGTGAAGACACACGCAGGTCTTTTGCAACTCATCTACGTGATGCATTGAAAAGGGCTGGTCTTGACGTTTTCATGGACCCTGAAATTAAAAGGGGAGACAATATCTCATCCTCCCTAATCAAGGCAATTGAAAGTTCAAGAATATCGATCCTTATTATTTCAGTAAAATATGCAGGCTCAAGCTGGTGCTTGCAAGAACTAGAAAAGATTATGGAATGTCATAGAACTGTTGGACAACTGGTTTTCCCAATATTCTTTGGCGTGGAACCATCACATGTACGGAAGCAATCTGGTGATTTTGGAAGTGAATTCAAAAAGCTCATGAAGAGAACCACGTTTAGCAAAGAACAAAAGTTGAATTGGACAAGAACACTCAATGAAGTTGCGAATTTAGCTGGATGGGACTACTCTCATCGTGATGGAACTGAAGCTGAGTTGATTAACCATGTTATTGACACTGTCACCAAGAACCTAGATGACAACACAAATTTGTTTGTCACACATCATCCTGTGGGGCTGAGATCTCGCATGAAGGAAATCATCCAAATGTTAAGTGACCAATCAGATGAGATTAAGGTGGTAGGGATTCTTGGGATGGGAGGGATTGGCAAAACAACCATTGCCAAATCCATTTATAATGAAGTTGGAAAAGACTTTGAGGCTAAAAGCTTCCTTGCAAACATTAAAGAAGCTTCAGAGTTAGAAAATGGCCTAGTTCATCTTCAAGAACAACTTCTTTCAAACATTTTACAAACAGGGAAGATGACACTAAATAGTATTGAATTGGGGAAAGGTATAATGAAAGAAAGGCTCTGTGGTAAAAAGGCACTAATCGTGTTAGATAGTGTCACTAACAAAGCTCAACTTGATGCTTTATGTGGGAGTCGTGAATGGTTTGGTCCAGGTAGTAGAATAATCGTTACTACTAGAGACCGAGATGTGCTTCGTATCATTCAAGCCAATAATGTGTACAAGGTGAAAGAAATGGATGATAACGAGTCTTTTGAACTTTTTAGTTGGCATGCATTTAAACAAGCGACCCCAATAGAAGATTTCGTTGATGATTCAGAAAGTGTTATTGCTTATTGCCAAGGGTTGCCCTTAGCTCTTGAAGTTCTTGGTGCTTATCTCTTTGATAGGCCAAAAGAAGCTTGGAAACCTGTTTTGGATAGTCTGAAAGAAATTCCAAATCATGAAATACATAGAAAGCTAAAAATAAGCTTTGATGGTCTAAGTAATGATTTCGAAAAAAATATATTCTTGGATATATGCTGCTTTTTCATCGGAAAGGACAGAAATTATGCGACACAAATATTAAATGGTTGTGGGCTTCATGCAGAGATTGGAATTACCCGACTCATAGAGTTGAGCCTCCTAAGAGTTGATAAGAATAATAGACTTGATATGCATAATTTAATACGTGACATGGGAAGAGAGATTGTTCGTGAAGAGTCACCGGAAGAACCTGGAAATCGTAGCAGATTATGGATTCGAGATAATGTGATTGATGTGTTAAGAAATTGTAGGGGAACAATCTCTGTTAAAGGACTAGCTTTGAATTTGTCAACAACAGAGACACAATCTTTTGATACGAGGGGATTTGAGCTGATGAAGAGACTTAGATTGCTTCAACTTGGCCATCATGTGAATCTTAGTGGCAACTATGAATATCTATCCAAAGAGTTGAGATGGCTTTGTTGGCATGGATTTCCTTTAACTTACATGCCCCAGAATTTTTGTCAAGAAAATGCAGTTGCCATTGATTTGAGATATAGTTATCTCACCCAAGCATGGAAGAATTGTCAGTTGTTGGAGAAGTTGAAAATTCTCAATTTAAGTCATTCTTACGACTTGAGAGAAACTCCCAATTTTTCAAGATTGCCGAATCTTGAAAAGCTAATACTTAAAGATTGTCCACGATTATCTTCTATTCATGAATCTATTGGAGATTTGAAGTGCTTAATATTGGCAAACTTAAAGGGTTGTAAAGATCTCAGTAACTTGCCGAAAGGTATATACAATTTGAAATCTCTAAAAACTCTCATCCTTTTTGGCTGTTCAAAACTTGAGAAATTGGAAGATGGGATCAACCAAATGGAATCCTTGGCAACTCTAATGGCAAATGAAACTGCTATAACACAAGTGCCATTTTCATTAGTGAGATCAAGAAGCATCACATATGTATCAATATGTGGCCATGAAGGATTCCCCAGAGATGTATTTCCAATTCTCGTTCAATCATGGGTGTCACCAAGAACTAATGCAAGGTCCCTTCAACATGGATTTGCAAGCATGCCATTTTTATTGCCACATCTTTTTCGTAGTTTCATAAGGAGACCTTATCATATTCCTGGGGCAACAAATCTAGCTTCAATTGGTTTTCATGATGACGACCAAGTAGACACAGCAAAGGCTGCAAATTTCTCCAGTTCCCTTACTATACAAGTGGGAGGATTTAGCCAAGTCATTGATACACTTTTGAAGAGTATCTGTCAGGTCTTCTACTTGCTTCTAAAGTCTTAA 4164 0.3742 MAASPSSPLPSSSPINPLSASSSSSSSSSANEERHYDVFLTYKTKCETIVSLETSLRDASIRTYMDHDGPISSTLKNAIELSRIVIFVFTKHFASSENCLNKLDIIINCHKDMGKKVLPILCGVSLSDIRQEIGSIAELMSRGDLQNKQDFFRWRSAFTEATSLSRCTISTKCSRYGRRIRDITHSIKIFLDATYLEIPPHLVPIQRRVKEVLHLSKYYSNDIAVREEKVILVGICGVVGIGKSTIARMIYDTISVNFESGSFLASIKKMWDKDNGQVLLQEQLISDITGKIDLKIHDTETGIKQIKIALENRRALVVLDDVDQIDQLVKLCGSREWFGFGSMILITSRSKHMFDQLIKVKYVYEVKKMDKRESLELLSWHAFKLSWDAFKQTSPSNDFINLAKNVIVHCEGLPLVLEVLGSLLYRKTTQEWECVLKKLKTIPSSQIQEKMKISCEHLDDSVKDLFFNIAYFYAGNEKLSVTQNLISGGGFQFPVEIGIKTLVELSLIKVDMNSRVHMHELLQEIGKGINPNKIKPKYNYHVFLSFSGEDTRRSFATHLRDALKRAGLDVFMDPEIKRGDNISSSLIKAIESSRISILIISVKYAGSSWCLQELEKIMECHRTVGQLVFPIFFGVEPSHVRKQSGDFGSEFKKLMKRTTFSKEQKLNWTRTLNEVANLAGWDYSHRDGTEAELINHVIDTVTKNLDDNTNLFVTHHPVGLRSRMKEIIQMLSDQSDEIKVVGILGMGGIGKTTIAKSIYNEVGKDFEAKSFLANIKEASELENGLVHLQEQLLSNILQTGKMTLNSIELGKGIMKERLCGKKALIVLDSVTNKAQLDALCGSREWFGPGSRIIVTTRDRDVLRIIQANNVYKVKEMDDNESFELFSWHAFKQATPIEDFVDDSESVIAYCQGLPLALEVLGAYLFDRPKEAWKPVLDSLKEIPNHEIHRKLKISFDGLSNDFEKNIFLDICCFFIGKDRNYATQILNGCGLHAEIGITRLIELSLLRVDKNNRLDMHNLIRDMGREIVREESPEEPGNRSRLWIRDNVIDVLRNCRGTISVKGLALNLSTTETQSFDTRGFELMKRLRLLQLGHHVNLSGNYEYLSKELRWLCWHGFPLTYMPQNFCQENAVAIDLRYSYLTQAWKNCQLLEKLKILNLSHSYDLRETPNFSRLPNLEKLILKDCPRLSSIHESIGDLKCLILANLKGCKDLSNLPKGIYNLKSLKTLILFGCSKLEKLEDGINQMESLATLMANETAITQVPFSLVRSRSITYVSICGHEGFPRDVFPILVQSWVSPRTNARSLQHGFASMPFLLPHLFRSFIRRPYHIPGATNLASIGFHDDDQVDTAKAANFSSSLTIQVGGFSQVIDTLLKSICQVFYLLLKS 1387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0825 1387 Pfam NB-ARC domain 723 942 IPR002182 GO:0043531
Lele40g0825 1387 Pfam NB-ARC domain 228 454 IPR002182 GO:0043531
Lele40g0825 1387 PRINTS Disease resistance protein signature 910 924 - -
Lele40g0825 1387 PRINTS Disease resistance protein signature 740 755 - -
Lele40g0825 1387 PRINTS Disease resistance protein signature 817 831 - -
Lele40g0825 1387 PRINTS Disease resistance protein signature 1220 1236 - -
Lele40g0825 1387 ProSiteProfiles TIR domain profile. 34 198 IPR000157 GO:0007165
Lele40g0825 1387 Coils Coil 1236 1256 - -
Lele40g0825 1387 Gene3D Ribonuclease Inhibitor 1038 1271 IPR032675 -
Lele40g0825 1387 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 701 970 IPR027417 -
Lele40g0825 1387 Gene3D - 709 874 IPR027417 -
Lele40g0825 1387 ProSiteProfiles TIR domain profile. 538 705 IPR000157 GO:0007165
Lele40g0825 1387 MobiDBLite consensus disorder prediction 1 29 - -
Lele40g0825 1387 Gene3D - 875 959 IPR042197 -
Lele40g0825 1387 Gene3D - 368 459 IPR042197 -
Lele40g0825 1387 SUPERFAMILY Toll/Interleukin receptor TIR domain 25 161 IPR035897 -
Lele40g0825 1387 Gene3D - 196 362 IPR027417 -
Lele40g0825 1387 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 540 1251 IPR044974 GO:0006952
Lele40g0825 1387 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 467 IPR027417 -
Lele40g0825 1387 SUPERFAMILY L domain-like 1016 1279 - -
Lele40g0825 1387 SUPERFAMILY Toll/Interleukin receptor TIR domain 533 681 IPR035897 -
Lele40g0825 1387 SMART till_3 35 164 IPR000157 GO:0007165
Lele40g0825 1387 SMART till_3 539 678 IPR000157 GO:0007165
Lele40g0825 1387 Pfam TIR domain 36 187 IPR000157 GO:0007165
Lele40g0825 1387 Pfam TIR domain 539 705 IPR000157 GO:0007165
Lele40g0825 1387 Gene3D - 534 708 IPR035897 -
Lele40g0825 1387 Gene3D - 29 195 IPR035897 -
Lele40g0825 1387 FunFam Disease resistance protein (TIR-NBS-LRR class) 536 707 - -
Lele40g0825 1387 SMART AAA_5 737 880 IPR003593 -
Lele40g0825 1387 SMART AAA_5 229 365 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0825 Lele-ChrLele40 18685293 18698688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0825 77 529 WRKY Transcription Factor Family AT4G12020 27.609 1.59e-29 126