Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0811 ATGTCTGATCATATACCCCTAGAAATTGTGGAGGAAATTCTTCACAGGCTCCCCGTCAAGAGTCTTGTGAAATTCACCTGTGTTTGCAGAGCTTGGAATTCCCTCATCACAGATCAAACTTTCATATCTGATCACCTCAACCGTACAATTCAAGCTTCCAATGGCAAAAGCTCCCTCTTTTTTCAATTTTGTCTTATGGAAGGGGAAAGGCCGAAGGATTTTTACTCATTGTACTTTGCTAATCAACGAACTGATCACTTGCATGTTGAGAGATTCCCACTCTCTCATCTATTTCGGCAGGATCGCTATACACTGTTTGCTGGCACATGCAATGGCCTCGTCTGTTCTGCTGACTATTCACCATTACATTCTGCAACTATCATCATTTGGAATCCCTTGCTTCGAAAATATATGGTGCTTCCCAAGCCAATCACAACCTACACAGACGGGGACCGTGAACGTGGTGCCAAATATGAGCTACTTTTTGGGTTTGGCTTTGATTCCAAGAACAACGATTATAAGATTGTAAGACTCATGAATCATTTGCCCACACAAGATACTCCTGACGTTGAGGTGTACTCTCTTCTTTCTCGCTGCTGGAGAAGTATCACTGTTAGGGTCCCTCAGTTTTATTGTAGTTATCATGATTTAGCCCCAGTGTTTGTGAATGGTGCAATACATTGGCTTGTTTACCGCCGTAGATATCAATGTGACGGTTCAAGTCACAAATTTATTTTATCATTTGATGTGACTAAAGAAACATTTGGAGAATTAATGTTACCACAGCAGTCACTATCGCGTCGAACTGTGATATCAAGATTAGTTGTTGGGGACGGAGGCCATTCACTTGCTGTGGTGAATCATCGTTTAATAAAGTGCCGCCGATGGATGCGCAGTATTTGGGTGATGAAGGAATATGGTGTTACTGAGTCATGGACTATGATACTCCAACGGGATAGAAGACGTTATGGGGGCATATCAAACATATTGGCTTTAACTAGCGATGGGGAAGTGGTCATACGTCTTGATGTTTTTGGAGATATAGTTCTAGTTGATCCATTCAAGAACTTGGTGAAGCCTATGGGATATCAGGCATGTGCTGAAGTTTATGTTGGATCTTATGTTGAGAGCTTGTTCTTGATGAATAAACAAGATGATGTTTTATCTTTCTAA 1173 0.4135 MSDHIPLEIVEEILHRLPVKSLVKFTCVCRAWNSLITDQTFISDHLNRTIQASNGKSSLFFQFCLMEGERPKDFYSLYFANQRTDHLHVERFPLSHLFRQDRYTLFAGTCNGLVCSADYSPLHSATIIIWNPLLRKYMVLPKPITTYTDGDRERGAKYELLFGFGFDSKNNDYKIVRLMNHLPTQDTPDVEVYSLLSRCWRSITVRVPQFYCSYHDLAPVFVNGAIHWLVYRRRYQCDGSSHKFILSFDVTKETFGELMLPQQSLSRRTVISRLVVGDGGHSLAVVNHRLIKCRRWMRSIWVMKEYGVTESWTMILQRDRRRYGGISNILALTSDGEVVIRLDVFGDIVLVDPFKNLVKPMGYQACAEVYVGSYVESLFLMNKQDDVLSF 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0811 390 Pfam F-box domain 5 39 IPR001810 GO:0005515
Lele40g0811 390 TIGRFAM F_box_assoc_1: F-box protein interaction domain 109 340 IPR017451 -
Lele40g0811 390 Pfam F-box associated 220 322 IPR006527 -
Lele40g0811 390 PANTHER OS02G0783600 PROTEIN 9 319 - -
Lele40g0811 390 SMART fbox_2 5 45 IPR001810 GO:0005515
Lele40g0811 390 SUPERFAMILY F-box domain 3 97 IPR036047 GO:0005515
Lele40g0811 390 ProSiteProfiles F-box domain profile. 1 45 IPR001810 GO:0005515
Lele40g0811 390 Gene3D - 3 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0811 Lele-ChrLele40 18594100 18595272 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0811 169 369 Carbohydrate Esterase AT1G25141 26.316 4.57e-06 45.8