Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0810 ATGCGAGGAATTTCAGTAAGAGAAGTCCATCAGTTGTCAAAAGCACAGGATAGACCAATCACACGGCTTGCCTCCATCAGAGAAGTGGCTCAGCTATCAAATGCCAGGCTAGTTTTGATTAGAGATGATATGGGATTTGATGGTCAAGGCTCTCATGAACCTGTTCACTTTGCACCTGCAAGAACATGGAAAGGAAAGGCATCTTTACCAGAATCAGAAGATATTATAACTGATGTTGAGGGATTAAAGGGGAGCTTTGATTTATTTGAGGAAGGAGGCCCGAGTTCATTTGCTGGTGCTAGTCACCCCCCTGAACCTGTTGACACGGATCTCATGAGAACCGTTTATGTACCAATAGGTCAAAATAAATCCAAGGCTGGAGGCTTAATGAAGAGCTTTTCTGTGAAGGGTTCTTCCCTAGACGATCTCTCAATTCGTGTTCCGCCTAAAAAACCAAGCCCAACTGTTCTTTCCCCTGCAGAAAGTCTAGTTGAAGAACAAAGTGATGTGGGGAACTTGCCCTCTCCTGTTTTGGGTCCTCGTACATCACAGAATACTGATCACTCTCTCCTTCCTCCAGATTCTGATGAGAAAGAATGTGTTTGGGATGCATCTTTGCCTCCGAGTGGAAATGTCAGTCCACTTAGTAGTATTGATAGTACTGGTGTTGTCACAGCAATGAGCATTGCTAATAGTTGTGCAAGTACATACCGGAGTGATGCACTCACTAGCGACGGCATGCTTAGTTTAGATAGGAACTTTGATAGTACTAAGGGGAGTGTGCGGGGTGATTCTCTAGAGAGTACAAAAACCAGTGCTAGTCAGGCAAGTGACAGCAGTGGTTTCAGTGATGACAGCAACTGGAGCAATGTTACTGGTAGTGCCAATAAGCCTCACAAAGGAAATGATCCTCGGTGGAAGGCTATCCTCGCCATTCGAGCCCGGGATGGGATTTTGGGCATGAGCCATTTTAAGCTTCTCAAAAGACTTGGCTGTGGTGATATAGGAAGTGTATACCTCTCAGAGTTGAGCGCAACTCGGTGTTATTTTGCTATGAAAGTTATGGACAAGGCATCCCTAGCAGCCAGAAAGAAGCTGACTAGGGCACAAACCGAAAGGGAGATTTTGCAGCTGCTTGACCATCCATTTCTGCCAACTTTGTATACTCATTTTGAGACAGACAGATTTTCCTGTCTGGTGATGGAATACTGCCCTGGAGGTGATTTACACACCTTAAGGCAACGTCAACCCGGGAAACATTTCTCAGAGTATGCTGCTCGTTTTTACGCCGCGGAGGTTCTTTTAGCACTTGAATATCTCCACATGCTTGGAGTAGTGTATCGAGACCTTAAACCTGAAAACGTGCTGGTACGAGATGACGGTCACATTATGCTTTCGGACTTTGATCTCTCCCTTAGATGTGCTGTTTCACCAACATTGATTAGAACATCTGATGGTGACCCTAAACGAGGTGGTGGTGCATTTTGTGTTCAGCCTGCTTGCACTGAGCCTTCATCGGTATGCATCCAACCTGCCTGTTTCATCCCTCGCCTCTTCCCTCAGAAAAACAAGAAATCACAGAAGCCTAAAGCTGAGCCAGGGTTGTCCGCCAACACGCTTCCTGAGCTTGTGGCTGAGCCCACTTCGGCTAGGTCTATGTCCTTTGTTGGAACACACGAATACCTTGCTCCTGAAATCATCAAAGGAGAAGGTCATGGCAGTGCAGTGGATTGGTGGACATTTGGAATTTTCCTGCACGAGCTCTTATACGGTAAAACGCCTTTCAAAGGATCGGGGAATCGTGCTACACTATTCAATGTGGTCGGCCAGCAGCTCAAATTTCCAGAGTCACCGGCCACTAGCTATGCTAGCCGGGATCTGATCCGAGGCTTGCTGGTGAAGGAACCACAGAACCGGCTCGGAGTAAAGAGGGGCGCAACCGAGATTAAGCAGCATCCCTTCTTCGAGGGAGTGAATTGGGCTCTGATTAGGTGCAGCACACCCCCAGAAGTGCCCAGACCAATCGAGAGCGAGATTCCCGGGGCCGTAAGATTTGGACCACCTGATCCAGTTGGCAACAATAGTAAGAGGATGGTAGGTACTGACATGAAGTCTGGGGGCAAATATCTAGACTTTGAGTTCTTCTAG 2148 0.4716 MRGISVREVHQLSKAQDRPITRLASIREVAQLSNARLVLIRDDMGFDGQGSHEPVHFAPARTWKGKASLPESEDIITDVEGLKGSFDLFEEGGPSSFAGASHPPEPVDTDLMRTVYVPIGQNKSKAGGLMKSFSVKGSSLDDLSIRVPPKKPSPTVLSPAESLVEEQSDVGNLPSPVLGPRTSQNTDHSLLPPDSDEKECVWDASLPPSGNVSPLSSIDSTGVVTAMSIANSCASTYRSDALTSDGMLSLDRNFDSTKGSVRGDSLESTKTSASQASDSSGFSDDSNWSNVTGSANKPHKGNDPRWKAILAIRARDGILGMSHFKLLKRLGCGDIGSVYLSELSATRCYFAMKVMDKASLAARKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRTSDGDPKRGGGAFCVQPACTEPSSVCIQPACFIPRLFPQKNKKSQKPKAEPGLSANTLPELVAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQNRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPIESEIPGAVRFGPPDPVGNNSKRMVGTDMKSGGKYLDFEFF 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0810 715 Gene3D Phosphorylase Kinase; domain 1 322 407 - -
Lele40g0810 715 MobiDBLite consensus disorder prediction 257 301 - -
Lele40g0810 715 MobiDBLite consensus disorder prediction 678 699 - -
Lele40g0810 715 MobiDBLite consensus disorder prediction 141 216 - -
Lele40g0810 715 FunFam serine/threonine-protein kinase D6PK-like 550 673 - -
Lele40g0810 715 MobiDBLite consensus disorder prediction 257 297 - -
Lele40g0810 715 FunFam serine/threonine-protein kinase D6PK-like 408 475 - -
Lele40g0810 715 ProSiteProfiles Protein kinase domain profile. 324 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0810 715 SMART serkin_6 324 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0810 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Lele40g0810 715 Pfam Protein kinase domain 325 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0810 715 Pfam Protein kinase domain 552 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0810 715 PANTHER FLIPPASE KINASE 1-RELATED 102 676 - -
Lele40g0810 715 Gene3D Transferase(Phosphotransferase) domain 1 550 672 - -
Lele40g0810 715 CDD STKc_phototropin_like 322 674 - -
Lele40g0810 715 FunFam Serine/threonine-protein kinase D6PK-like 322 407 - -
Lele40g0810 715 Gene3D Transferase(Phosphotransferase) domain 1 408 478 - -
Lele40g0810 715 SUPERFAMILY Protein kinase-like (PK-like) 306 679 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0810 Lele-ChrLele40 18579327 18582291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0810 19 715 AGC Kinase Gene Family AT2G44830 70.304 0.0 940
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele40g0810 Pkinase 1.3e-36 CL0016