Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0800 ATGTCTAATCATTTACCCCTAGAAATTGTGGAGGAAATTCTTCACAGGCTCCCCGTCAAGTCTCTTGTGAAATTCACCTCTGTTTGCAGAGGTTGGAATTCCCTCATCACAGATCAAACTTTCATATCTGATCACCTCAACCGTACAATTCAAGCTTCCAATGGCAACAACTCCCTCTTTTTTCAATTTTGTCTTATGGAAGGGGAAAGGCCGAAGGATTTTTACTCATTGTACTTTGCTAATCAACGAACTGATCACTTGCATGTTGAGAGATTCCCACTCTCTCATCTATTTCTGCAGGATCGCTATACACTGTTTGCTGGCACATGCAATGGCCTCGTATGTTCTGCTGACTATTCACCATTACATTCCGCAACTATCATCATTTGGAATCCCTTGCTTCGAAAATATATGTTGCTTCCCAAGCCAATCACAACCTACACAGACGGGGACCGTGAACGTGGTGCCAAATATGAGCTACTTTTTGGGTTTGGTTTTGATTCCAGGAACAACGATTACAAGATTGTAAGACTCATGAATCATTTGCCCACACAAGATACTCCTGACGTTGAGGTGTACTCTCTTCTTTCTCGCTGCTGGAGAAGTATCACTGTTAGGGTCCCTCAGTTTTATTGTAGTTATCATGATTTAGCCCCAGTGTTTGTGAACGGTGCAATACATTGGCTTGTTTATCGCCGTAGATATCAATGTGACGGTTCAAGTCACAAATTTATTTTATCATTTGATGTGACTAAAGAAACATTTGGAGAATTAATGTTACCACAGCAGTCACTATCTCGTCGAACTGTGATATCAAGATTAGTTGTTGGGGAAGGAGGCCATTCACTTGCTGTGGTGAATCATCGTTTAATAAAGTGCCGTCGATGGATGCGCAGTATTTGGGTGATGAAGGAATATGGTGTTACTGAGTCATGGACTATGATACTCCAACGGGATAGAAGACATTATGGGGGCATATCAAACATATTAGCTTTAACTAGCGATGGGGAAGTGGTCATACGTCTTGATGTTTTTGGAGATATAGTTCTAGTTGATACATTCAAGAACTTGGTGAAGCCTATGGGATATCAGGCATGCGCTGAAGGACGACTTGACGGAAAGTTGAACGGCGACGGAGATGAAGCAATCAATGGAGACGGGGCAAGTTTGAGATGCGTGGGGGGAGATTGGAAGCGACGAAGGCTTAATTTGCAGTTTTCTGTTCACTTCCTCGTGCCGCCCGACATATCTGAGCGAAGCTTCTCTTCTAGGGGCAGAGCGAAGATCCGGGCTGAGTTGCTTGACGAGGGCTCCCTTGCAGAAGCTAGTGATGGCAAGCTTGACGGGAAGTTGGGCGGCGACGGAGATGAAGCAATCGACGGCAATGATGATTGTGGCAATCAACAAAGATTTCTTCGGTGGCCGACGGTTTCGACCTCGCAATTTCAACTTCCAAGGAAGAGAGATCGCAAGTGCGACCTTGCTTTTCCCCGTTTTTGA 1500 0.4447 MSNHLPLEIVEEILHRLPVKSLVKFTSVCRGWNSLITDQTFISDHLNRTIQASNGNNSLFFQFCLMEGERPKDFYSLYFANQRTDHLHVERFPLSHLFLQDRYTLFAGTCNGLVCSADYSPLHSATIIIWNPLLRKYMLLPKPITTYTDGDRERGAKYELLFGFGFDSRNNDYKIVRLMNHLPTQDTPDVEVYSLLSRCWRSITVRVPQFYCSYHDLAPVFVNGAIHWLVYRRRYQCDGSSHKFILSFDVTKETFGELMLPQQSLSRRTVISRLVVGEGGHSLAVVNHRLIKCRRWMRSIWVMKEYGVTESWTMILQRDRRHYGGISNILALTSDGEVVIRLDVFGDIVLVDTFKNLVKPMGYQACAEGRLDGKLNGDGDEAINGDGASLRCVGGDWKRRRLNLQFSVHFLVPPDISERSFSSRGRAKIRAELLDEGSLAEASDGKLDGKLGGDGDEAIDGNDDCGNQQRFLRWPTVSTSQFQLPRKRDRKCDLAFPRF 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0800 499 Pfam F-box domain 4 39 IPR001810 GO:0005515
Lele40g0800 499 Pfam F-box associated 220 322 IPR006527 -
Lele40g0800 499 TIGRFAM F_box_assoc_1: F-box protein interaction domain 109 340 IPR017451 -
Lele40g0800 499 Gene3D - 2 44 - -
Lele40g0800 499 SUPERFAMILY F-box domain 3 97 IPR036047 GO:0005515
Lele40g0800 499 ProSiteProfiles F-box domain profile. 1 45 IPR001810 GO:0005515
Lele40g0800 499 SMART fbox_2 5 45 IPR001810 GO:0005515
Lele40g0800 499 PANTHER OS09G0372900 PROTEIN-RELATED 5 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0800 Lele-ChrLele40 18486431 18491462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0800 169 319 Carbohydrate Esterase AT1G25141 28.758 6.24e-06 45.8