Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0786 ATGGATGATAAAGTGTACAGCTTGACGCTGTTCTTCACTGTAATCCTTATAACCTTTCTCCTGTCACTAATATCCTATCGTTGCACACGTGCACAGTCCAACACGTCAAGCCAGCAATCAGATAGGGTTGATCGCAGTAATAATGTAGATGCTACTACAGACTCAAACCAGATGACAGTGACGGTGACGGTGGAGGCATGCCGGCCGGATCATCAAACTAGGGTTTGCAGCTACGTGGACGACCCTGAGCTTCTTTGCAGTTCAAAAGACAACAAGTTGTGTGAGGATAAGGATGGTGGTGTTGTTTCAAGTAGTCCTAGTTGCCGCTCAATATGCTTGATGGATTACAAAGAATCTGATATCTTGCGAGTTTTGCCTGATTGTACCTGTGTTAATCCTTGGATCACAGGGCATTTGACCTGCCCCATTTGTAGAAGTTCTGTATGTTAG 450 0.4489 MDDKVYSLTLFFTVILITFLLSLISYRCTRAQSNTSSQQSDRVDRSNNVDATTDSNQMTVTVTVEACRPDHQTRVCSYVDDPELLCSSKDNKLCEDKDGGVVSSSPSCRSICLMDYKESDILRVLPDCTCVNPWITGHLTCPICRSSVC 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0786 149 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 148 IPR013083 -
Lele40g0786 149 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 147 IPR045899 -
Lele40g0786 149 SUPERFAMILY RING/U-box 110 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0786 Lele-ChrLele40 18308492 18308941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0786 103 147 C3H Transcription Factor Family AT5G06490 56.863 2.98e-12 59.7