Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0783 ATGGCTTCGCCTTCTTCGCCGGTGGATTCTACCCCACCTCCTGATCCACCTTCCGCTGTGCCTCTTCCACTGCCGGCGCCACCGTCGTCTCGCCGTCTTCCGCCGCCTTGCTGGTCTCTCGATGAGACTGTGGCTTTAATCGATGCGTATCGTGACAAGTGGTATTCCCTTGGTCGGGGTAATCTGAAGGCTACTCATTGGCAGGAGGTCGCCGATGCGGTTACGAGTAGTTGTCCGAATGCGTCTCCTCCTAAGACCGCCGTACAGTGTCGCCACAAGATGGAGAAGCTCCGTAAGCGGTACCGCACAGAGATCCAGCGTGCCCGGTCTCTGCCCGTTGCCCGATTCAATTCGGGGTGGGTCCATTTCAAGCGCATGGATTCTATGGAGAAAGGTCCTTCACCGGTTAAACCTGAGAATAATTCCGATAGCCCGGATGAGATTGACCACGATGACGACGATGACGATCAAGATTTGTACGACGAATTTAAGAATGCTCCTGGAAATAACACCAGGAGCTCGAATAAATTGTATAGGAACGGAATTGGCGGTGGTTCTGAAGGCGGCGGCGTCGGTGGGGGCGGATTTCGCATTCGGATTCCAACTGGGGTGAGCATAGCACAACCTGGGACCAAGTTTTACGGGAAGCTTGCTGATCAGAAATTTAACTCGAATTCGAACTCGGCCACACCTAGCTCTAATTGCAGCCCCAATTACGGCACAAGGATTTTGAAAGAGAGAAGTGGATTGGGGAAGAGGGAGAGAGGAGAGAGGGATCCAGTGGGAGAGATGGTGACTGCAATTAAGGTTTTAGGAGATGGGTTTGTGAGGATGGAGCAGATGAAGATGGAAATGGCAAGAGAGATTGAAACCATGAGGATGGACATGGAAATGAAACGTACTGAGATGATTTTGGAGTCTCAACAACGGATTGTTGAAGCATTCGCTAAAGCAGTTTCAGAGAAGAAGGCTAAGAGAATGCCATCACCTTCAGAACCATAG 1002 0.513 MASPSSPVDSTPPPDPPSAVPLPLPAPPSSRRLPPPCWSLDETVALIDAYRDKWYSLGRGNLKATHWQEVADAVTSSCPNASPPKTAVQCRHKMEKLRKRYRTEIQRARSLPVARFNSGWVHFKRMDSMEKGPSPVKPENNSDSPDEIDHDDDDDDQDLYDEFKNAPGNNTRSSNKLYRNGIGGGSEGGGVGGGGFRIRIPTGVSIAQPGTKFYGKLADQKFNSNSNSATPSSNCSPNYGTRILKERSGLGKRERGERDPVGEMVTAIKVLGDGFVRMEQMKMEMAREIETMRMDMEMKRTEMILESQQRIVEAFAKAVSEKKAKRMPSPSEP 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0783 333 SMART 118neu2 45 134 IPR006578 -
Lele40g0783 333 MobiDBLite consensus disorder prediction 1 35 - -
Lele40g0783 333 MobiDBLite consensus disorder prediction 164 180 - -
Lele40g0783 333 Gene3D - 38 103 - -
Lele40g0783 333 MobiDBLite consensus disorder prediction 7 34 - -
Lele40g0783 333 MobiDBLite consensus disorder prediction 145 160 - -
Lele40g0783 333 Pfam Myb/SANT-like DNA-binding domain 36 129 IPR044822 -
Lele40g0783 333 MobiDBLite consensus disorder prediction 127 191 - -
Lele40g0783 333 Coils Coil 91 111 - -
Lele40g0783 333 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 14 320 IPR044823 -
Lele40g0783 333 FunFam Trihelix transcription factor ASIL2 38 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0783 Lele-ChrLele40 18253588 18254589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0783 37 129 Trihelix Transcription Factor Family AT3G14180 37.634 2.45e-16 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele40g0783 Myb_DNA-bind_4 1e-19 CL0123