Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0762 ATGATCATGATGGAGGATGAGTTTAGTGCATTTGAAATAGCAAGTGATGATCATGGTGGACATAACGTAGCAAAGTGTACGAGAGCTGTGGATGAGCCCTTATTGATCAACCACTTTGGAGAGGCCATAATTGAACCTACCAAGAGAACCAAGAAGGCCGGTATTGTTGGGAAATATGGCACCCGATATGGTGCTAGTCTTAGGAAGCAAATTAAGAAGATGGAAGTGAGTCAGCACAGCAAATACTTCTGTGAGTTCTGTGGGAAGTATGCTGTTAAGAGGAAGGCTGTCGGTATATGGGGCTGCAAAGATTGTGGAAAAGTGAAAGCTGGAGGTGCTTACACATTGAACACTGCAAGTGCGGTGACAGTCCGTAGCACCATAAGGAGGTTGAGAGAGCAGACTGAGAGTTAA 414 0.4493 MIMMEDEFSAFEIASDDHGGHNVAKCTRAVDEPLLINHFGEAIIEPTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0762 137 Pfam Ribosomal L37ae protein family 49 133 IPR002674 GO:0003735|GO:0005840|GO:0006412
Lele40g0762 137 TIGRFAM eL43_euk_arch: ribosomal protein eL43 48 136 IPR002674 GO:0003735|GO:0005840|GO:0006412
Lele40g0762 137 SUPERFAMILY Zn-binding ribosomal proteins 55 127 IPR011332 GO:0006412
Lele40g0762 137 Gene3D - 3 51 IPR042086 -
Lele40g0762 137 Gene3D - 52 137 IPR011331 GO:0003735|GO:0005840|GO:0006412
Lele40g0762 137 FunFam 60S ribosomal protein L37a 47 137 - -
Lele40g0762 137 PANTHER ZGC:171772 45 136 - -
Lele40g0762 137 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 49 117 IPR002674 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0762 Lele-ChrLele40 17896291 17901053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0762 47 137 Cytoplasmic Ribosomal Protein Gene Family AT3G10950 94.505 2.91e-59 176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0885 37 18689512 18694995 Lele40g0762 40 17896291 17901053 hybridization
Lele38g0816 38 19884394 19886284 Lele40g0762 40 17896291 17901053 hybridization