Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0731 ATGGAGTTTCACAAACTCGAAACCCCGAAAACTAACAGTGACCAAGTCGTCATCAACATGGATCCGCAGCAACAACAACCAAACCCTAAACAAGATTACTCTCCTCAATCCTATATTAATCATCCCAGAAACAGAACACTCCAACGCCTCAATTTTTCCAAACCAAGATCACGCTTTGAGGAGATCAACTACCCTATCTCAGCACCCAAACGAACCTACAATCCCATCCCTGAATCAGATGATCATAGCCAGCCCTTGAGTTCGCAAACAGAAAACCCTACCAACTACTCTTCCACCGAAGAAGACGACGACGAATGGTTCGAAAACAGAGACGAGTACGGCTACGATGACGCCGACGATGCCACCGGAAAGTGCAGAAAGAGGAAGAAGAAAATCAACAAGAGGGCTTTACTGGAATGGACTTTGTTCCTCATCATCATGACTTGTCTGGTATGTTCTCTCACTATTAAATCCCTAGAGCACAAGACTCAGTGGAGCTTAGAAATCTGGAAATGGTGCTTGCTGGTGATGGTAATCTTCTGCGGCCGTCTCGTCTCCGAATGGGTAGTCCGAATCCTGGTGTTTCTCATTGAACGCAACTTCATGTTGAGAGAGAAAGTTCTCTACTTCGTTTACGGTCTTCGAAAGAGTTTTCAGAACTGTGTGTGGCTTGCCCTAGTTTTGATCGCATGGATGATTATGTTCCACGACGCTCATAACAAAAACAAAGTCCTCAAGAAGTTCTTTAGGGCTCTCGTCGCCATCCTCGTCGGCGCCATCATATGGTTACTAAAAATAGTATTCGTTAAGGTTCTTGCGTCGTCGTTCCACGTCGCGGCTTTCTTTGACAGAATGAAAGAGAGTGTTTTCCATCACTATGTCTTGGAGGCACTCTCCGGGCCGCCGTTGGATGAGGAGGAGATGGACCTGCCTCGGCGGCATTTGCAGGCGTCAAAGTCGATGCCGGCGAGGCTGAGGTACGAGAAGTCTCAGCCGTTGAAGTCACGGTCGAGGAAGGGGGATGGATCGAGGGGGATTGACATAGAGAAGCTCAAGAGGCTGAGCATGGACGGGAGAGCGACGGCGTGGAGTGTGAAGAGGTTGGTTAGTTACGTGATGTCGTCGGGATTGTCAACGATTTCGAGGACGGTGGACGATTTTACCAACGCCGAGTCGGAGATTAATAGCGAGTGGCAGGCTAGGACTTGTGCTCAGAGGATATTCAAGAATGTCGCAAAGGATGGGGCCAAGTACATAGAAGAAGAAGATTTACTGAGATTCTTGAAGAGAGACGAAGTTTACATGATATTTCCTTTATTTGGAGGAGCACTTGAAACTGGAAAAATCACCAAGTCCTCTTTTCGAACTTGGGTGGTACATGCGTACGTAGAGAGAAAAGCATTGGCACATTCATTAAACGATACGAAAACAGCAGTTCGGCAACTGCACAAACTGGCAAGTGCAATTGTAATAGTGATCATAACTGTGGTGTCTCTCTTGGTGATGGGTTTGGCCACAACTAAAGTCATCTTCGTCGTCACTTCTCAACTCTTGCTCGTAGGTTTTGTGTTCCAAAATATGTGCAAAACTGTCTTCGAATCCATCATCTTTGTCTTCCTCATGCACCCTTTCGATGTTGGAGATCGCTGTGTCATTGATGGTATTCAGATGATTGTGGAAGAGATGAATATATTGACAACAGTGTTCTTAAGATATGACGGTGAAAAAATATATTACCCGAATTCAGTTCTGCTGACGAAACCTATAAGCAATTTCAGAAGAAGCCCTGATATGGCTGACGCTGTGGACTTCACCATTGACGCCTCTACCTCCACCGACAATCTCTCTGCCCTCAAGAAGGCCATTCAAGCGTACATCGAGAGCAAACCCAAGTACTGGAATCCAAAACACGCAGTGATAGTGAAGGAGATAGAGAACATGGACAAGATGAAGATGGCTCTCTGCGTTCAACATACCATTAACCACCAAAACTTTGGCGAGCGGAACGGCCGGCGAACGGAGCTTTTGCTCGAGCTAAAGAGGATCTTTGAGAGCCTTGGCATTAAGTATCGTCTTCTTCCTCAAGAAGTACATCTCACGCAGGTTAACTTTGGCAACAACTATACTGGAGCCTTCCCACTTTCATCTTCATAA 2154 0.4624 MEFHKLETPKTNSDQVVINMDPQQQQPNPKQDYSPQSYINHPRNRTLQRLNFSKPRSRFEEINYPISAPKRTYNPIPESDDHSQPLSSQTENPTNYSSTEEDDDEWFENRDEYGYDDADDATGKCRKRKKKINKRALLEWTLFLIIMTCLVCSLTIKSLEHKTQWSLEIWKWCLLVMVIFCGRLVSEWVVRILVFLIERNFMLREKVLYFVYGLRKSFQNCVWLALVLIAWMIMFHDAHNKNKVLKKFFRALVAILVGAIIWLLKIVFVKVLASSFHVAAFFDRMKESVFHHYVLEALSGPPLDEEEMDLPRRHLQASKSMPARLRYEKSQPLKSRSRKGDGSRGIDIEKLKRLSMDGRATAWSVKRLVSYVMSSGLSTISRTVDDFTNAESEINSEWQARTCAQRIFKNVAKDGAKYIEEEDLLRFLKRDEVYMIFPLFGGALETGKITKSSFRTWVVHAYVERKALAHSLNDTKTAVRQLHKLASAIVIVIITVVSLLVMGLATTKVIFVVTSQLLLVGFVFQNMCKTVFESIIFVFLMHPFDVGDRCVIDGIQMIVEEMNILTTVFLRYDGEKIYYPNSVLLTKPISNFRRSPDMADAVDFTIDASTSTDNLSALKKAIQAYIESKPKYWNPKHAVIVKEIENMDKMKMALCVQHTINHQNFGERNGRRTELLLELKRIFESLGIKYRLLPQEVHLTQVNFGNNYTGAFPLSSS 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0731 717 MobiDBLite consensus disorder prediction 1 104 - -
Lele40g0731 717 Gene3D - 543 592 IPR023408 -
Lele40g0731 717 MobiDBLite consensus disorder prediction 78 96 - -
Lele40g0731 717 PIRSF Memb_At2g17000 4 710 IPR016688 -
Lele40g0731 717 SUPERFAMILY Sm-like ribonucleoproteins 533 592 IPR010920 -
Lele40g0731 717 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 22 702 IPR016688 -
Lele40g0731 717 MobiDBLite consensus disorder prediction 10 53 - -
Lele40g0731 717 FunFam Predicted mechanosensitive ion channel 543 592 - -
Lele40g0731 717 Pfam Mechanosensitive ion channel 484 689 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0731 Lele-ChrLele40 17421417 17429804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0731 27 703 Mechanosensitive Ion Channel Family AT5G12080 45.533 0.0 598