Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0725 ATGGCCGGCCTTGACTTAGGTTCAGCATCTCACTTTGTTCATCAGCTTCAACGCCCTGATCTTCGCTCCAATAATCATGAAGATGACAACCGGCAGGACCACGACGGCGATGACCCTCAAGGGCTTGAGCTAGTTACTCCCAACTCGGGAGGATCTGGCGGTGGTGGCGAGGTTAGTGGTCGTCGGCCAAGGGGTAGGCCTGCTGGCTCGAAGAACAAGCCGAAACCGCCGGTGATCATTACTAGAGAAAGTGCAAACACGCTTAGGGCTCATATCCTTGAAGTTAGCAGCGGCTCCGATGTGTTTGACTCGGTGGCGACCTATGCGAGGAAGCGGCAGCGAGGGATCTGCGTCCTCAGTGCCAGTGGCACCGTCACCAACGTGACCTTGCGGCAGCCAACAGTCGCTGCTGTTGCGACGCTGCACGGGAGGTTTGAGATACTGTCCTTGGCTGGATCGTTTTTGCCGCCTCCAGCTCCGCCGGGTGCCACCAGCCTGACGATATTTCTCGCCGGAGGGCAAGGTCAAGTTGTGGGAGGAAATGTTGTTGGTGCCTTGATAGCTGCTGGGCCTGTTATTGTTATTGCTTCCTCATTTTCAAACGTAGCATATGAGAGATTGCCCTTAGATGAAGAAGAACCACTACTGATGCAGCAAGGTCAATCTTCCGGCAGTGGCGGCGGCGGCGGAAACTCGTTCCCGGACCTGTCTTCAGGGCTGCCGTTCTTTAATCTGCCGTTAAACATGCCGCAGTTACCGATTGATGGCTGGGCCGAAAACTCAGGTGGTGGTGGTGGGAGGCAACCATACTGA 813 0.556 MAGLDLGSASHFVHQLQRPDLRSNNHEDDNRQDHDGDDPQGLELVTPNSGGSGGGGEVSGRRPRGRPAGSKNKPKPPVIITRESANTLRAHILEVSSGSDVFDSVATYARKRQRGICVLSASGTVTNVTLRQPTVAAVATLHGRFEILSLAGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALIAAGPVIVIASSFSNVAYERLPLDEEEPLLMQQGQSSGSGGGGGNSFPDLSSGLPFFNLPLNMPQLPIDGWAENSGGGGGRQPY 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0725 270 MobiDBLite consensus disorder prediction 20 40 - -
Lele40g0725 270 Gene3D - 88 219 - -
Lele40g0725 270 CDD DUF296 89 171 IPR005175 -
Lele40g0725 270 FunFam AT-hook motif nuclear-localized protein 88 214 - -
Lele40g0725 270 ProSiteProfiles PPC domain profile profile. 85 221 IPR005175 -
Lele40g0725 270 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 25 223 IPR014476 GO:0003680
Lele40g0725 270 Pfam Plants and Prokaryotes Conserved (PCC) domain 89 201 IPR005175 -
Lele40g0725 270 MobiDBLite consensus disorder prediction 1 79 - -
Lele40g0725 270 SUPERFAMILY AF0104/ALDC/Ptd012-like 85 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0725 Lele-ChrLele40 17332938 17333750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0725 1 270 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 60.000 1.16e-93 276