Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0713 ATGTGGGGGATCTCTTTTCAGTTAAAACTAAATACAGCCATCTATTTGAATGCTAGAATTCTTCATATGACATCACTTTGTCCTGGGGCATGCTGCCATGTATTCGCAAGTGTACGGAAAGCAGCCATTGTGGTTCATATCTTTAGCACTCGCATCTTCTCTTGTCACTCTCATATTTTGTACTTAGTGAGGTTGAGAATGGAAGAACCACAGCTGGTTTCTAGAGGAGCAGAAGCACTCCTTCATCTCTCTCCTGGATCCTCAATTTCTGTTGCTTATCATCCTCTTTTTGGTCCTCATGATGATCTCATCTTCCTAGAGCTTGACGAGAAACTTCTCCCAGAAGTTCTTCATGAAAGGGTGGTTCTAAGAGGACAGCCAGATGAAGATGCAGTTCTTTGCACTCAGTCCAAAACTTATTCCATCAAGTTTGTTGGAACTTCCAATTCTGTATTCCTTGTACCACCAAATCAATCAGAATATCATCCACCTCCACAAGAGAGTGATAGTCACAATGATCATGACCAAAAAGCTGCTGTATCTGTGATCAAAGTTGTACCTGGTAGCATGGAGCTTGTTGAGGTTGCTCCTAGACTTGATAAACTCAAGTCACTTCTTTCAGAGAACCCTTACAGTTGTGACGAGTTAGAAGTAGAAAATTTGGAAGGCAACAACGAACCTAGAACAGGATTATACAATTGGAATGACCTTGTTGACAATATTCAAGCTAGTGATGATGAAATAAGGTCTGGACTTGAGGTACTTTCTGCTGTTGAGATTAATGGGCATTGGAGATTAGTGGATGAGAGTTACATGCTCACCATTCTAAGAATGCTTTTGTACAATTCAGTGTTGAATGACTGGTCGCGTAATGCTCTTAATGAAGATGAAGTTGTGAATATTCTGGAATCAGATGGATTTCCAAGGGTACTTGCAAAACACTGTTTGCATGTATTTGGAGAGAAAGTAAATGATGATCTGGGTAGCTGTGTCCGGAAATTGGACGACAAGCGAGTGTGTGTGCAGTTTGCAAGGGAAATCCTGGGAGGAGGAAAGAAAAAGTTGGAGAGTTTCATGGATGAATGGAGGCAGAAGATTCCAGATGGCATGCAACCCACTTTTGATCTTTTGAAAGGAGAGGTTTTGACTGAAAGGGTCGGTGTTGAGACATGGATTCATGCCTTCAGTGTTTCATCTTTGCCCTCCACTCCAGCTGAACGTTTCTCCATCCTTTTCAGAGAACGGAAAAAGTGGGATTGGAAGGATCTACAGCCTTATATCAGGGATCTAAACGTACCAGGTCTTTCTTCAGAAGCTTTGCTTCTCAAATACACCCGAAGAACACAACCAACTCCAGATGCAGAACCAGTTTTCAGTGCAAGATAA 1386 0.4185 MWGISFQLKLNTAIYLNARILHMTSLCPGACCHVFASVRKAAIVVHIFSTRIFSCHSHILYLVRLRMEEPQLVSRGAEALLHLSPGSSISVAYHPLFGPHDDLIFLELDEKLLPEVLHERVVLRGQPDEDAVLCTQSKTYSIKFVGTSNSVFLVPPNQSEYHPPPQESDSHNDHDQKAAVSVIKVVPGSMELVEVAPRLDKLKSLLSENPYSCDELEVENLEGNNEPRTGLYNWNDLVDNIQASDDEIRSGLEVLSAVEINGHWRLVDESYMLTILRMLLYNSVLNDWSRNALNEDEVVNILESDGFPRVLAKHCLHVFGEKVNDDLGSCVRKLDDKRVCVQFAREILGGGKKKLESFMDEWRQKIPDGMQPTFDLLKGEVLTERVGVETWIHAFSVSSLPSTPAERFSILFRERKKWDWKDLQPYIRDLNVPGLSSEALLLKYTRRTQPTPDAEPVFSAR 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0713 461 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 75 461 IPR019128 GO:0007064|GO:0031390
Lele40g0713 461 MobiDBLite consensus disorder prediction 155 176 - -
Lele40g0713 461 Pfam Sister chromatid cohesion protein Dcc1 105 427 IPR019128 GO:0007064|GO:0031390
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0713 Lele-ChrLele40 17102457 17104830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0713 76 461 C3H Transcription Factor Family AT2G44580 57.143 1.58e-160 457