Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0705 ATGGAAAGTGATAATAGCTTCTCTCCTAAACCACCTTCTTCTTCCTTTTCTTCTCCATCTTCTTCATTATCAATGTCAACATCAGCAACAGTTTCATGTTTGAAATTCAAGCATGATCAGTCTGAAAGTGATGATCTGAATGGGAAGCGACAGAAAAACAAGAAGAAGAGACGGAGAAGTGAGAGTGATGATAATAATAATTCTGAAGGGGATGATAATAAGCATTCTACTTACAGAGGTGTGAGAATGAGAGCTTGGGGAAAATGGGTTTCTGAGATTCGTGAGCCCAGAAAAAAGTCAAGAATATGGCTTGGAACATTTCCTACTGCAGAAATGGCGGCTCGAGCCCATGATGTAGCCGCTTTAGCCATCAAAGGTCAATCGGCTTACCTCAATTTCCCAGAACTAGTTCACCAGCTTCCCCGACCAGACAGCTCGGTTCCCAAGGATATCCAGGCCGCGGCTGCAAAGGCTGCAGCAGCCACCACTATGTTCAATGAGGTCAAACACTGTCAAGCCGAAGAAGAAGCCAGAGGAGCCGAGCCGAGCCAGGAAGAGCAGGCGACTTCTTCTTCTTCTTCAAGTTCTGTTCCTGGGGACGAAGACGCATTGTTTGATCTTCCAGATCTCTTCACTGATGGGGAAATTAATGGAGTCTTCTCATATTCTTGGAATTTATGTGCAGTAGTTGATAGTGGCGGTTTAAGGCTTGATGAGCCTTTTTTATGGGAGAAATATTAA 741 0.4426 MESDNSFSPKPPSSSFSSPSSSLSMSTSATVSCLKFKHDQSESDDLNGKRQKNKKKRRRSESDDNNNSEGDDNKHSTYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALAIKGQSAYLNFPELVHQLPRPDSSVPKDIQAAAAKAAAATTMFNEVKHCQAEEEARGAEPSQEEQATSSSSSSSVPGDEDALFDLPDLFTDGEINGVFSYSWNLCAVVDSGGLRLDEPFLWEKY 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0705 246 ProSiteProfiles AP2/ERF domain profile. 77 134 IPR001471 GO:0003700|GO:0006355
Lele40g0705 246 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 58 212 - -
Lele40g0705 246 Pfam AP2 domain 78 126 IPR001471 GO:0003700|GO:0006355
Lele40g0705 246 MobiDBLite consensus disorder prediction 173 200 - -
Lele40g0705 246 MobiDBLite consensus disorder prediction 183 199 - -
Lele40g0705 246 SMART rav1_2 77 140 IPR001471 GO:0003700|GO:0006355
Lele40g0705 246 MobiDBLite consensus disorder prediction 57 76 - -
Lele40g0705 246 CDD AP2 76 136 IPR001471 GO:0003700|GO:0006355
Lele40g0705 246 FunFam Ethylene-responsive transcription factor 2 76 135 - -
Lele40g0705 246 MobiDBLite consensus disorder prediction 1 76 - -
Lele40g0705 246 PRINTS Ethylene responsive element binding protein signature 100 116 IPR001471 GO:0003700|GO:0006355
Lele40g0705 246 PRINTS Ethylene responsive element binding protein signature 78 89 IPR001471 GO:0003700|GO:0006355
Lele40g0705 246 Gene3D AP2/ERF domain 77 136 IPR036955 GO:0003700|GO:0006355
Lele40g0705 246 SUPERFAMILY DNA-binding domain 76 135 IPR016177 GO:0003677
Lele40g0705 246 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0705 Lele-ChrLele40 16912336 16913076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0705 56 242 AP2-EREBP Transcription Factor Family AT2G44940 50.917 4.02e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele40g0705 AP2 1.6e-13 CL0081