Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0694 ATGTTGGGATACGAATGGGGGAATCCTCCATCCACGATAGTGCTCGCCGGAAATGAAGAAGCTGCGGTTGCTACCGGTGCAGACTCTGACCAGACCCACCGGCAAATTTTCGACCACTATACTTCTCATTCCTTATTGCCGGAGCAGCTTCTTCATCAGCAACACCACCACCAGTCGGCAGGGCCCACACAACACTCCATCGCCAGTTCCACCGCTGATTTCTCTCACTACCAGTTTAACCCTCAACCCCCCCACCACCACCACCACAGCCACAATATTCAGCATTCCTTCTTTGACCCACGCGCCTTCCCCGGCGCGTCCTCTTCGTTCCCTCCACCACAGCCTCATCATCCCCCGCCTCCTTCCATGCTCTCTCTTGACCCGCTTCCGGGCGTCAACGCCGGCGCCCACTGTGAACCTGGTGGGTTTCTGGTGGTTCCCAAGTCGGAGGACGTGGGTCGGTCCACTGACTTCCCAGCGTCGAGAATTGGGCTCAACCTTGGTGGCCGCACGTACTTCTCATCGTCGGAGGATGACTTCGTGAGCCGTCTCTATCGCCGGTCCAGGCCAGCTGAAGCGGCAATGATGATGGCGGCGTCGAACTCGCCTCGTTGCCAAGCCGAAGGCTGCAATGCTGATCTATCACGCGCGAAGCACTACCACCGCCGTCACAAGGTGTGCGAGTTTCACTCCAAGGCGGCCACCGTCATCGCCGCTGGCTTAACACAGCGATTCTGCCAACAGTGTAGCAGGTTCCATCTTCTTTCTGAGTTTGACAATGGGAAACGAAGCTGCAGGAAGAGACTTGCAGATCATAATCGTCGCAGAAGAAAAACCCAGCAGCCAAATCCAGAAATCATGAAAACCCAGATCGAGAATTCACGAAATTCCACTTTTGAAAGTGTTACAAGATCTCCACCGGATTCTGGAGCTCAGGCGATGTCATCGGTGACGGTGGCAGTGTCTCCACCGGACTATTTCCGGCAACCGGCATATCAGAATCAGAGGAATAGTCCATCGGCAACATCAAGCTCACTGTTCTTCTCAAGCGGGTAG 1056 0.553 MLGYEWGNPPSTIVLAGNEEAAVATGADSDQTHRQIFDHYTSHSLLPEQLLHQQHHHQSAGPTQHSIASSTADFSHYQFNPQPPHHHHHSHNIQHSFFDPRAFPGASSSFPPPQPHHPPPPSMLSLDPLPGVNAGAHCEPGGFLVVPKSEDVGRSTDFPASRIGLNLGGRTYFSSSEDDFVSRLYRRSRPAEAAMMMAASNSPRCQAEGCNADLSRAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHLLSEFDNGKRSCRKRLADHNRRRRKTQQPNPEIMKTQIENSRNSTFESVTRSPPDSGAQAMSSVTVAVSPPDYFRQPAYQNQRNSPSATSSSLFFSSG 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0694 351 Pfam SBP domain 205 278 IPR004333 GO:0003677
Lele40g0694 351 MobiDBLite consensus disorder prediction 272 351 - -
Lele40g0694 351 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 186 342 IPR044817 GO:0003677
Lele40g0694 351 MobiDBLite consensus disorder prediction 106 126 - -
Lele40g0694 351 MobiDBLite consensus disorder prediction 283 319 - -
Lele40g0694 351 FunFam Squamosa promoter-binding-like protein 14 196 266 - -
Lele40g0694 351 Gene3D - 196 266 IPR036893 GO:0003677|GO:0005634
Lele40g0694 351 ProSiteProfiles Zinc finger SBP-type profile. 202 279 IPR004333 GO:0003677
Lele40g0694 351 MobiDBLite consensus disorder prediction 328 351 - -
Lele40g0694 351 MobiDBLite consensus disorder prediction 75 131 - -
Lele40g0694 351 SUPERFAMILY SBT domain 203 281 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0694 Lele-ChrLele40 16759091 16761413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0694 1 252 SBP-box Gene Family AT1G02065 44.569 3.88e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele40g0694 SBP 1.2e-30 No_clan