LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele40g0661	ATGGCTCACTTCACTCTTCATCTTCCATTAACCTCTCAATTCTTAAATCCTCTCGTGGCTTTCTGTTCATTCTTATTGCTCATAGTGAGTGCTTCCTCTTGCTCCTACAACCCTAGAAAGTTTCTTAATTCTTCTTCGTCCTACACTTCTAATTCCAATTGGTCTCCGGCTGATGCTACATGGTACGGAAGCCCCAACGGCGCCGGAAGTGATGGTGGTGCTTGTGGATATGGCAGTAGTGTAGGACAACCTCCATTTTCTTCGATGATATCAGCAGGAGGTTCTTCTATATATCAATCCGGCAAAGGCTGTGGAGGTTGCTATGAGGTGAAGTGCACGTCAAATCGAGCATGTTCAGGCAACCCAGTGACAGTGGTGATAACTGATGAGTGTCCTGGGTGTGGTTCTGCTCAGAGATTTCACTTTGATTTGAGTGGCACTGCTTTTGGCGCCATGGCTGTTTCCGGTCAGGCAGATCAACTACGCAATGCTGGCAAGTTGGAGATTCAATACAGAAGTGTTAAATGCAACTTCCCAGGGAAAACCATAGAATTCAAAGTGGACTCAGGATCAAACCCATATTATTTTGCCGTTGTGATAGAATATGAAAATGGTCACGGCCTTGCCAACGTTGAACTCAAGGAAGCTTATGAGTCAGCCTCATGGCGTCCCATGCAACAATCCTGGGGTGCAGTTTGGAAGCTTGAATCTGGCGGCTCACTGCTTCAGGCACCATTCTCTGTCCGGCTAACCGCACCAGAGTCGTCGGACTCTCAAAACTCCGTCGAGGCAAGTAATGTGATCCCTGCAGGGTGGAGTCCTGGTCAGACATATCGATCTCTGGTAAACTTCCACTGA	858	0.4755	MAHFTLHLPLTSQFLNPLVAFCSFLLLIVSASSCSYNPRKFLNSSSSYTSNSNWSPADATWYGSPNGAGSDGGACGYGSSVGQPPFSSMISAGGSSIYQSGKGCGGCYEVKCTSNRACSGNPVTVVITDECPGCGSAQRFHFDLSGTAFGAMAVSGQADQLRNAGKLEIQYRSVKCNFPGKTIEFKVDSGSNPYYFAVVIEYENGHGLANVELKEAYESASWRPMQQSWGAVWKLESGGSLLQAPFSVRLTAPESSDSQNSVEASNVIPAGWSPGQTYRSLVNFH	285

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele40g0661	285	Gene3D	-	178	285	IPR036749	-
	Lele40g0661	285	Gene3D	-	38	177	IPR036908	-
	Lele40g0661	285	Pfam	Expansin C-terminal domain	183	269	IPR007117	-
	Lele40g0661	285	SMART	dpbb_1	90	171	IPR007112	-
	Lele40g0661	285	PRINTS	Expansin/Lol pI family signature	94	112	IPR007118	GO:0005576
	Lele40g0661	285	PRINTS	Expansin/Lol pI family signature	71	89	IPR007118	GO:0005576
	Lele40g0661	285	PRINTS	Expansin/Lol pI family signature	164	180	IPR007118	GO:0005576
	Lele40g0661	285	PRINTS	Expansin/Lol pI family signature	53	68	IPR007118	GO:0005576
	Lele40g0661	285	PRINTS	Expansin/Lol pI family signature	222	236	IPR007118	GO:0005576
	Lele40g0661	285	ProSiteProfiles	Expansin, family-45 endoglucanase-like domain profile.	72	181	IPR007112	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele40g0661	Lele-ChrLele40	14708066	14710393	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele40g0661	36	284	Expansin Gene Family	AT1G65680	61.200	3.81e-106	308

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