LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele40g0644	ATGAAGCATCTTCTTTCTCGTTTTAGTTCTCAACTTGTTTCCCTTGTCACTCTTATTATGTCTTTGTTTCGTGTTCTTGCCGTCCGCGTCGGTCCCTTTTACTTTGAACTCTTTTATTTCATAGTCATGTCTGTTTTTGGTTTCCTTGGTCTCAAAATCTTAAAGCCAAGAGTCCCTCTTGCCACAAGTAACATGGATTTATTGTACACTTCTGTTTCTACAGCCACTGTTTCCAGTATGACTGCTGTAGAAATGGAAGTTTTCTCTAATTCACAGCTCATTCTCATGACCTTCCTTATGTTTGTTGGTAGCGAGGTTTTCACTTCCATGCTTGGCCTTTTCTCTTCTTCCTTCAATCTTTCCCAGAAACAGAGCCTAAAAAATACAGTAACAACTCACCATATTCCTCATCAAGTTCCTAATAATCCCAATCAAATCGAGATCAATTTAGTTTCTCTGAAAAAGCAGAATGAAGATGATCGTAGTGACAATAATATTGTTCAAGAAGATAAGTTGAGTGAACTGAAGCGTAGGTCTGTTAAGTGTCTTGGGTTTGTGATTTTGGGTTCTATTATGGCAGTTCACTTAGTAGGTTCTGGTTTGGTCTCAACCTACATAAGCATCGTACCAAGTGCGAGACGAGTACTGAGAAACAAAGGGATTAGCATACAAACTTTTTCTGTGTTCACCATAGTTTCCTCCTTCGCTTCTTGTGGTTTCGTACCCACAAACGAGAATATGATTGTGTTCAAGAAGAATTCAGGTTTTCTCTTGCTTATTTTGCCATTTCTTTATATTGGGAACACCATGTACGCGCCGTTCGTAAGGCTCGTGATCTGGGTTCTTGGCAAAGTGATGGAAAGAGAAGAGTTCACTTATATTCAGAAGAATTATAAGGAGATCGGTTATATTCATTTGCTTTCTCGTGTTCATTGCTGGCTCCTTGTTGCTACTGTTTTAGGTTTTAATCTAATACAGTTCGTGATGTTCTGCTGCCTGGAGTGGAATTCAGAGAACATGGACGGTCTAAATAGCTATCAGAAACTGATTGCTTCATTGTTCGAAATTACAAATGCGAGACATGCCGGCGAAACTGTTTTCGATTTGTCTTCAATATCTTCTGCAATATTGATGCTCTTCGTTGTCATGATGTACCTCCCACCATACACAACATTTTTACCCATAAGAGACAACAAGAATGAGACAAAGAAAGGGAAAACAAGCCTCAGGGAGTGGTTTTTGTTCTCTCAACTCTCATATCTTGTCATATTCATAATTTTGATTTGCCTTACTGAAAGCAGAAGAATGAAAGAAGATCCCCTCAACTTTAATGTGTTGAGCATTACTCTAGAAGTCATCAGTGCGTATGGAAACGTGGGATTCTCAATGGGATATAGTTGCGAAAGACAATTGAAAGCAGATGCGAATTGCAGAAATTTGTGTATTGGACTTTCAGGTAAATGGAGTAACAAAGGAAAGTTCATTCTTATAGTGGTCATGTTCTTTGGGAAGCTCAAGAAACACAATATGAGAGGTGGTCAAGCTTGGGATCTCTCTTAA	1560	0.3885	MKHLLSRFSSQLVSLVTLIMSLFRVLAVRVGPFYFELFYFIVMSVFGFLGLKILKPRVPLATSNMDLLYTSVSTATVSSMTAVEMEVFSNSQLILMTFLMFVGSEVFTSMLGLFSSSFNLSQKQSLKNTVTTHHIPHQVPNNPNQIEINLVSLKKQNEDDRSDNNIVQEDKLSELKRRSVKCLGFVILGSIMAVHLVGSGLVSTYISIVPSARRVLRNKGISIQTFSVFTIVSSFASCGFVPTNENMIVFKKNSGFLLLILPFLYIGNTMYAPFVRLVIWVLGKVMEREEFTYIQKNYKEIGYIHLLSRVHCWLLVATVLGFNLIQFVMFCCLEWNSENMDGLNSYQKLIASLFEITNARHAGETVFDLSSISSAILMLFVVMMYLPPYTTFLPIRDNKNETKKGKTSLREWFLFSQLSYLVIFIILICLTESRRMKEDPLNFNVLSITLEVISAYGNVGFSMGYSCERQLKADANCRNLCIGLSGKWSNKGKFILIVVMFFGKLKKHNMRGGQAWDLS	519

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele40g0644	519	Pfam	Cation transport protein	407	476	IPR003445	GO:0006812\|GO:0008324\|GO:0055085
	Lele40g0644	519	Pfam	Cation transport protein	167	396	IPR003445	GO:0006812\|GO:0008324\|GO:0055085
	Lele40g0644	519	PANTHER	POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED	28	519	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele40g0644	Lele-ChrLele40	13069040	13071790	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele40g0644	52	518	Inorganic Solute Cotransporters	AT4G10310	48.017	2.01e-152	443