Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0626 ATGGCTGTCACTCTGCACACCAACCTTGGCGACATCAAGTGCGAGATCTTCTGCGACGAGGTCCCTAAGGCATCCGAGAATTTTTTAGCACTATGTGCAAGTGGTTACTATGATGGGACAATTTTTCACCGCAACATCAAAGGTTTTATGATTCAAGGTGGAGATCCAACTGGTACTGGCAAAGGGGGCACCAGCATATGGGGCAAAAAATTTAACGATGAGATTAGAGAATCTCTTAAGCTTAGGAAGCTGCAAGATGATTGGCTTTGGAAAATGACTGACAGGCAATCTAGATATGGCCTGAAATCCTTAGTTGCTATTCACCATAGAAGATTTCTGAATTTCAAAGAAGCGTGGATTACTTATTTCTCGGGATCTGCGTAG 384 0.4323 MAVTLHTNLGDIKCEIFCDEVPKASENFLALCASGYYDGTIFHRNIKGFMIQGGDPTGTGKGGTSIWGKKFNDEIRESLKLRKLQDDWLWKMTDRQSRYGLKSLVAIHHRRFLNFKEAWITYFSGSA 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0626 127 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 3 79 IPR002130 GO:0000413|GO:0003755
Lele40g0626 127 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 2 82 IPR044666 -
Lele40g0626 127 SUPERFAMILY Cyclophilin-like 1 80 IPR029000 -
Lele40g0626 127 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 37 54 IPR020892 GO:0003755|GO:0006457
Lele40g0626 127 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 16 31 IPR002130 GO:0000413|GO:0003755
Lele40g0626 127 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 54 IPR002130 GO:0000413|GO:0003755
Lele40g0626 127 Gene3D - 1 94 IPR029000 -
Lele40g0626 127 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 127 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0626 Lele-ChrLele40 8289669 8294779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0626 3 79 U-box Gene Family AT5G67530 59.740 3.15e-28 105