Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0625 ATGGTTTGTGACGGTAGCTATAGCAGGTTAAAGTTTTGCCACCCTGACGAACTGTTATGGCCTAATATTCTTTCAAACTTCTTTATTTCGCATTTTCAGCACAATGCGAGGGGGATATTGTCAATGGCTAACAGTGGTCCGAATACTAATGGAAGCCAATTTTTCTTAACGTATGCAAAGCAGCCACATTTGAATGGACTGTATACTGTGTTTGGCAAAGTAATTCATGGATTTGAAGTACTTGATCTCATGGAAAAGACTCAAACGGGCCCTGGGGATCGACCACTTGCTGAGATAAGGCTGAACCGAGTAACAATACATGCTAATCCGCTGGCTGGTTAG 342 0.424 MVCDGSYSRLKFCHPDELLWPNILSNFFISHFQHNARGILSMANSGPNTNGSQFFLTYAKQPHLNGLYTVFGKVIHGFEVLDLMEKTQTGPGDRPLAEIRLNRVTIHANPLAG 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0625 113 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 31 105 IPR002130 GO:0000413|GO:0003755
Lele40g0625 113 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 66 81 IPR002130 GO:0000413|GO:0003755
Lele40g0625 113 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 53 65 IPR002130 GO:0000413|GO:0003755
Lele40g0625 113 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 38 53 IPR002130 GO:0000413|GO:0003755
Lele40g0625 113 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 28 106 IPR044666 -
Lele40g0625 113 Gene3D - 9 113 IPR029000 -
Lele40g0625 113 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 106 IPR002130 GO:0000413|GO:0003755
Lele40g0625 113 SUPERFAMILY Cyclophilin-like 30 110 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0625 Lele-ChrLele40 8269208 8270215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0625 17 110 U-box Gene Family AT5G67530 43.617 1.71e-21 86.3