Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0600 ATGGATAATTATGGGTCTTCATCGCCACACCGTTATCCAAACCCGTATGGATACCACAGTACTCCTCCTCCTCCGTATCCACCTCCACCTTCAGATCCAATGGCACCTCCTCCTTACCCTTATGCATTCAATCATTCACAATCCTTCAACCATCCCTACCCCCCACCTCCTCCACAATTTGATCATAGCCATTACCCTCCACCACCTGAGTATAGCCACCCCCCTCCGCCGCCAGATTATAGCCATGCTAATCCTCCGTCTGACTATAGTCATCCCCCTCAACCACTGTATTCTGCTTCTCATCCTTATCCTTATCCATACCTCGTTCCTTCAGGGGTTCATAACACTTCTCAGCCTGCCCACCATCACAGTTTTCAGTATGGATCATCTCATTTTCCTTCCCAACAGACGGAGGCAGGTCCGTATCCCCAAAGTCAACCCCTTTCTCATTCACGTGCCAATAGCTTCTCTGGTTCCCCCCAGCATGAGAGAATGAGCTCTTCTGGGGATATATCATTGCAAACTAGTCATAGTTTTAGTCCTTCTCGGACTTCTGCTTACCCACCTTTGGATGATCTTATGGGAAGAGTTAGCTTGTCTGATAACCTGCCAACCGCTCCTGCATCACCCCCTGCACCTGTTGGGCAGCAACTGGCATATTCCATTTCAGTTCCACACCAAGATAAGAGAGAGGAATTTTACGGTTATCCTAATAACTCCTTCTCTGGTCGGCTTGATTCATTTAAACTTTCATCTTATTCGGGCTCATTTAATGATTCGATGCATAGTCAGAGTTTGCAGATTGTTCCAACACAGAATAAAGGGTCGTTGAAAGTTTTGCTCCTACATGGAAATTTAGATATATGGGTTCATGAAGCAAAAAATCTTCCAAATATGGACATGTTCCACAAAACTCTAGGGGATATGTTCGGTAAATTGCCAGGAAATATGGGCAACAAAATTGAGGGAACTATGAGTAAGAAGATTACCAGTGATCCTTATGTAACAATTTCAGTATCCAATGCTGTAATTGCAAGGACTTTTGTGATTAGCAACAGTGAGAATCCTGTTTGGACTCAACATTTCCATGTTCCTGTTGCACATAATGCTGCTGAAGTGCACTTTGTTGTTAAAGACAGTGATGTAGTAGGTTCACAGCTCATTGGCATTGTATCAATTCCTGTGGAACAAATATACTCAGGGGGTAGAATAGAAGGTACCTATCCCATACTGAATAATAGTGGGAAGCCTTGTAAGCCAGATGCTGTCTTGAGCTTATCTATTCAGTACATCCCAATTGAGAGACTGAGCATTTATCACCAAGGAGTTGGAGCAGGACCCGAATACACTGGAGTTCCTGGAACTTATTTTCCTCTGAGGAAAGGTGGAACTGTTACTCTATATCAAGATGCCCAAGTTCCAGATGGCTGCCTCCCTAATGTGATACTTGACCAAGGGATGTATTATGCAAATGGAAAATGTTGGCATGACATCTTTGATGCCATACGTCAAGCTCGGCGTTTGATTTATATTACAGGGTGGTCAGTATGGCATAAAGTTCTGTTGGTAAGGGATGTTGGTAATCCATCAGGTTACGCACTGGGTGAGCTTCTAAGGTCCAAGTCACAGGAAGGAGTCAGAGTGCTTCTCCTTATTTGGGATGATCCTACGTCAAGGAGCATTTTAGGTTATAAAACAGCGGTGCTTGATCTTCTGAAATCCCTGATGCACAAGCTTTATAAAAAGCAAGGTCCTATTATTTTCTTCGCTGTTTTACTGGTTTTCACCTGGAAATCAAAGGGTAATGTTGGTGGTTGTCCACGGGAGCCATGGCATGACTTGCATTCTAGAATTGATGGTCCTGCAGCATATGATGTTCTGACCAACTTTGAGGAGCGCTGGTTAAAAGCTTCAAAACCTCATGGGATAAATAAGTTTAAGAGTTCATCGTATGATGATGCTTTGCTTAGGCTGGAAAGACTTCCAGACATTATTGGCATGTCTGATGCTCTTAGTTCTAATGATAATGACCCTGAAGCTTGGCATGTTCAGATATTTCGATCAATTGATTCAAATTCTGTAAAAGGGTTTCCAAAGGATCCAAAAGATGCGACAAGCAAGAACTTAGTTTGTGGGAAGAATGTGTTGATCGACATGAGCATACATACAGCATACGTTAAGGCCATTCGTGCTGCACAGCACTACATATATATAGAGAATCAATATTTCATTGGGTCTTCATACAATTGGAGTCAACATAAAGACCTTGGTGCTAATAATTTGATTCCAATGGAAATTGCCCTAAAAATTGCTGAAAAGATCAGGGCCAATGAACGATTTGCTGTGTATATTGTTATTCCAATGTGGCCTGAGGGAGTTCCCACTGGGGCTGCCACGCAAAGGATTCTATTTTGGCAGCATAAAACAATGCAAATGATGTATGAGACAATTTACAAGGCTTTGGTTGAGGCTGGGCATGAAGAGGCATTCTCACCAGAAGACTACTTGAACTTCTTCTGTCTAGGCAATCGGGAGGTCAATGATACATATGGTGATAATGCAACGCCTGGAAATCCTCCTCCAGCAAATAGTCCACAGGCACTAAGTCAAAGTAGCCGACGTTTCATGATTTACGTTCATTCAAAAGGCATGATAGTTGATGACGACCACAATGCTGAGGTCCTGGGGTTGTCTTCTGATTCCCCCGTGCCCCAAGAGTAG 2721 0.4322 MDNYGSSSPHRYPNPYGYHSTPPPPYPPPPSDPMAPPPYPYAFNHSQSFNHPYPPPPPQFDHSHYPPPPEYSHPPPPPDYSHANPPSDYSHPPQPLYSASHPYPYPYLVPSGVHNTSQPAHHHSFQYGSSHFPSQQTEAGPYPQSQPLSHSRANSFSGSPQHERMSSSGDISLQTSHSFSPSRTSAYPPLDDLMGRVSLSDNLPTAPASPPAPVGQQLAYSISVPHQDKREEFYGYPNNSFSGRLDSFKLSSYSGSFNDSMHSQSLQIVPTQNKGSLKVLLLHGNLDIWVHEAKNLPNMDMFHKTLGDMFGKLPGNMGNKIEGTMSKKITSDPYVTISVSNAVIARTFVISNSENPVWTQHFHVPVAHNAAEVHFVVKDSDVVGSQLIGIVSIPVEQIYSGGRIEGTYPILNNSGKPCKPDAVLSLSIQYIPIERLSIYHQGVGAGPEYTGVPGTYFPLRKGGTVTLYQDAQVPDGCLPNVILDQGMYYANGKCWHDIFDAIRQARRLIYITGWSVWHKVLLVRDVGNPSGYALGELLRSKSQEGVRVLLLIWDDPTSRSILGYKTAVLDLLKSLMHKLYKKQGPIIFFAVLLVFTWKSKGNVGGCPREPWHDLHSRIDGPAAYDVLTNFEERWLKASKPHGINKFKSSSYDDALLRLERLPDIIGMSDALSSNDNDPEAWHVQIFRSIDSNSVKGFPKDPKDATSKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIRANERFAVYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEAGHEEAFSPEDYLNFFCLGNREVNDTYGDNATPGNPPPANSPQALSQSSRRFMIYVHSKGMIVDDDHNAEVLGLSSDSPVPQE 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0600 906 PANTHER PHOSPHOLIPASE D 604 889 IPR015679 -
Lele40g0600 906 CDD C2_plant_PLD 278 431 - -
Lele40g0600 906 MobiDBLite consensus disorder prediction 16 40 - -
Lele40g0600 906 MobiDBLite consensus disorder prediction 114 185 - -
Lele40g0600 906 SUPERFAMILY Phospholipase D/nuclease 702 889 - -
Lele40g0600 906 SMART C2_3c 285 407 IPR000008 -
Lele40g0600 906 MobiDBLite consensus disorder prediction 114 213 - -
Lele40g0600 906 Gene3D C2 domain 279 419 IPR035892 -
Lele40g0600 906 Gene3D Endonuclease Chain A 599 659 - -
Lele40g0600 906 Pfam C2 domain 284 410 IPR000008 -
Lele40g0600 906 MobiDBLite consensus disorder prediction 1 98 - -
Lele40g0600 906 SUPERFAMILY Phospholipase D/nuclease 457 639 - -
Lele40g0600 906 ProSiteProfiles C2 domain profile. 262 408 IPR000008 -
Lele40g0600 906 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 282 433 IPR035892 -
Lele40g0600 906 Gene3D Endonuclease Chain A 684 891 - -
Lele40g0600 906 MobiDBLite consensus disorder prediction 50 98 - -
Lele40g0600 906 FunFam Phospholipase D delta 279 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0600 Lele-ChrLele40 5522703 5532709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0600 601 890 Phospholipase D Gene Family (Wang group) AT2G42010 76.508 8.77e-162 500