Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0579 ATGGATATCGAAGGATCTCTCGGACGGTTGGGTTCCAACGCCAAAACACTCCTGCTTCTTTTTCCCCGGAGCAGAGAATCGCGACGGGGTCACCGACCTTCTTCATTCTTTCTGCACGGCAAACGAATCGTTGATCGTCGTCGAAGTGGTCGTCGATACTTTGAGGTCGTATTCGATTCCATATCGCAATTTCGAACTACTGTTGGGCTTCTACTTAACTCCAGGGTTATCAAGTGTAGAATAAAAAGGATGAAGTTACAGGCGCCAATTCCAGGACAGATGTCACGTCAGGTACCTAATCAATCAGGGTCCCAGTTGCCTGGACTGACCCAGCCAAATCGAAATGCCCTCCCTCAGACCCCAAATTTAGGCGGTGTTCCACGCTCCACCATTAATATGGACCCTGAATTTCTTAGAGCACGCACGATTATGCAAGAGAAGATCTATGATATCTTATTGCAGCGGCAACAACATCCAGTAACAGAAGTGCATAAAAGAAGGTTCAAGGATTTTGCTAAACGCCTGGAGGAAGCCATGTTAAAAACTGCCACATCTAAGGAAGAATACTTGAACTTGGATACACTAGAGAGCCGTCTGCTTAATTGCATCAGACGGCCATCTATGAATAATAATAACCAACAATATCTTCAACATGTTAGCTCTTCTCCAATAGGTACAATGATACCAACACCTGGTATGCCACATGTTGTGAATTCAAGCATGGCAGTTACATCTTCTGTAGATGCCTCAATGATTGTTACCCCTCGAAATAATAGCATGGCATCTCCTTCTGTCAATAGTGGAAGCATGTTTCCTACAGGTGGCTTGCATGGGAACTCCTTAAGTAGATCTGATGGTTTGTCTAATGGCTATCAGCCATCCTCAACCAGCTTTTCAATTGGTTCTGGGGGAACCATGTCCACAATGGGTGCACAGAGAATTGCAAGCCAGATGATTCCCACTCCTGGATTTAGTGGAAGCAATAACTCATTCATGAATTTAGAATCTTCTGATAATAGTGGTGTCTTTTCCAGTGCTGAATCCTCAATGGTTTCGCAGCCTCAGCATCAGAAACAGCATGCTGGGGGCCAAAACAATAATGTGATGCAGAACCTTGGCGGCCAAATGGGCAGTGTAATGAGATCTGGGTTACAGCAAAAATCTTTTGCATACTCAAATGGAGCTATAAGTGGTGGGCTAGGATTGATTGGAAACAACAGGCAACATACAAATGATGCTGGCTTTGCTGATGCCTATGTCACAACTTATGCTAATTCCCCTAAACACCAACAGCAGCACTTTGATCAAAATCAGCAACTGCCGGTGCAGGGTGAAGGATATGGATTGAATAATGTTGACTCATTTACTTCTGGAAACTTTTATACATCTGCAACATCTTCTGGATCTATGATGAACAGTCAGAACTTGAATTCAGTAAAATTGCCTGCAATATCCCAAACCAACTCTCTTATAAATAGTCATTCCAATTTACATGGTATGCAGCAGACTGCTCATCTAAAGTCTCAAGCTATGAATCAGTTAGAGAAGTTGAATTTTCAGTCTTCTTTTACATCCAGAGAGGGCCTTCTGGATCCTCAACAGCAATATCTGCAACATTCCCAACAATTTCAACAGCCAGGGCAGTATGCTCAACAGCAATTTGAACAGTCAGAGCAGTATGCTCAGAAGCATTTTCAGCATAAGCTGCAAAGTCAGCAGCCCATGCATTTAGTCAACAGTAATGCTTTCAGTCAGTCTCATATCTCTTCCAATTTAGAAGGTCAAGTGAAGTCTGAGCCTGGAGTTAATCACCACATAGAAGTCTTCAGTTCACAGGTTTCTGAACAGTTTAATATTTCTGAGATGCAAAACAAGTTGCAGCAGAACTCTACTGATAGTTGTTCAGGGGATGCCCAACATCTTTCGTTTTCAAATGGTCAGAACGATTTATCTGCAACAACTACTCAAAACTCACATCAAATGTTGCACCCACGTCAACTGGTTTCAGAGCCTGAAAATAATTTTAATTGTCTTTCAGTTGGGACACAATCTAAATCAGCACATATAAATCAATGGAATTCTCAATCACAAGGCGGTAACCACATGCCAGGGAATATGTCACATGAGCAGCACCTTCACATGGATTTCCATAAGAGAATATCGAGGCAAGATGAAGCTCAGTGCAATAATTTATCTTCAGATGGAAATGTTGGTCAAGCTGTTGCTTCTAGAGGCACTGATCCACTTGATTCAAATGTTACTATTAAGAAAGCACATAGGAACCAACAGAGGTGGCTTTTATTTCTACTTCATGCTCGGCGGTGTCCTGCCCCAGAAGGACGATGCCAAGAGCGATATTGTTATAATGCCCAGAAGTTATGCAGACACATTGACGGATGCAATCAGCCTCATTGCTCATATCCCCGCTGTCATCATACCAGGCTATTGCTAATTCATTTCAGAAACTGTAAGGACCAGTATTGCCCAGTTTGTGTCTTTGTTCGAAATTACAGACGCTCATTTCAAGTTAAGCCTCAATCTCAGCCAGATTCTGATTCAGGAGTGCCTGTTGCAGTGAATGGATCTTGTAAACCCTACAATTCTGTAGTTCCATCACCTAGATTGATCCCAAAACCTCTACCTGTTATTGAAACTTCAGATGACCTGCAGCCATCTCTGAAACGTATGAAAATTGAGCAGTGTACCAAGTCCTTTAGTTCGGAAAATGACAACTCAGCAGTTTTGGCTAATTGTGAATCTAATGTTTCCAAGGATGCCCTGAACCAAGACTATATCCATGGTGATATGCCAATGTCAATTAAATCCGAATTCACAGAAGTTAAGGCTGAAGGTCCAGTGCATTCAACACCCACAAATCCTTGTGAAGTGAAAATAAATAATGCGGAGGACAGATGGCCTAGTAGTGAACCTGTCACATATGATGATGAGTCTTTCAATTTAGCTAGGCCAGAAAATATTAAACCTGAGAAAGAAACTGGACAAGATCAGCCAGAAAACCTTACCCAGCCATCAGAAAATTTGGGAGGGACAAAGTCTGGTAAGCCTAAAATAAAGGGGGTCTCATTGACTGAACTATTCACTCCAGAGCAAGTCAGGGAACACATCAATGGTCTAAGGCAATGGGTTGGCCAAAGCAAAGCGAAAGCAGAAAAGAATCAAGCAATGGAGCATTCAATGAGTGAGAACTCGTGTCAGTTGTGTGCTGTAGAGAAGCTTACATTTGAACCACCGCCTATTTATTGCTCAACTTGTGGTGCTCGCATTAAACGAAACGCTATGTATTATACCATGGGCACTGGTGATACACGTCATTATTTTTGTATTCCGTGCTATAATGAGGCTCGTGGAGATGCCATTTTTGTTGATGGAACTGCCATTCCTAAGGCAAGGCTGGAGAAAAAGAAAAATGATGAAGAAACTGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCTTGGCAGCACCAAATTTGTGCCTTATTTAATGGTCGAAGAAATGATGGGGGACAAGCTGAATACACTTGCCCTAACTGCTATATTCAAGAGGTAGAAAGAGGAGAGCGCAAACCCCTACCTCAAAGTGCTGTTCTTGGGGCCAAGGATTTGCCTAGAACAATTCTCAGTGATCACATAGAGCAACGGCTGTTTAGGAGACTAAAACAAGAGAGACAAGAGAGGGCCAGGCTTCAAGGAAAAAGTTATGATGAGGTGCCTGGGGCTGAAGCACTTGTTGTCAGAGTGGTGTCATCTGTGGACAAGAAGTTAGAAGTGAAACAGCGATTCTTGGAAATTTTCCGGGAAGAAAATTATCCAACAGAATTCCCATATAAATCTAAGGTAGTTTTGTTGTTTCAAAAGATTGAAGGTGTGGAAGTATGCCTTTTTGGCATGTATGTTCAAGAATTTGGATCTGAATGTCAGTTCCCCAATCAGCGTCGGGTATATCTTTCATATCTTGATTCTGTCAAGTATTTTAGGCCTGAAGTTAAAACAGTGACTGGAGAGGCTCTTCGGACGTTTGTTTATCATGAAATTTTGATTGGATACCTTGAATATTGTAAGAAACGTGGTTTTACAAGCTGCTATATTTGGGCCTGTCCTCCATTGAAGGGTGAAGATTATATTTTATACTGTCATCCGGAAATTCAGAAAACTCCAAAATCTGATAAGCTTCGAGAATGGTATTTATCAATGTTAAGGAAAGCTACCAAGGAGACTATTGTGGTTGATCTCACCAACTTGTATGACCATTTCTTTGTATCTACTGGAGAATGTAGAGCTAAGGTTACCGCTGCAAGACTTCCTTATTTTGATGGTGACTACTGGCCTGGGGCTGCGGAGGATTTGATTTATCAGCTTAACCAAGAAGAAGATGGCAGAAAACTGAATAAGAAAGGAACAACTAAAAAGACTATAACAAAGAGGGCTTTAAAGGCATCTGGTCAGTCGGATCTCTCTGGAAATGCATCAAAAGATCTTCTCCTAATGCATAAACTTGGCGAAACCATTAGCCCGATGAAGGAAGATTTTATCATGGTTCATTTGCAACATGCATGCAGTCACTGTTGTATTTTAATGGTATCAGGCAACCGTTGGGTTTGCAACCAGTGCAAAAATTTTCAGATATGTGACAAATGTTACGAAGAAGAACAAAAGCGTGAAGAAAGAGAACGACATCCTATTCATCATAGGGAGAAACATACCCTTTACCCACATGAAATTTCTGATGTACCAGCTGATACAAAGGACAAAGACGAGATTCTTGAGAGTGAATTCTTTGACACTAGACAGGCATTTCTTAGTCTGTGTCAGGGTAACCATTATCAGTATGATACTCTGAGGCGGGCCAAGCATTCATCAATGATGGTCCTTTATCATCTTCATAATCCGACTGCTCCTGCCTTTGTGACAACTTGTAATATATGCCATCTTGACATTGAAACTGGTCAGGGTTGGCGTTGTGAAGTTTGCCCTGATTATGACGTGTGCAATGCGTGTTATCAAAAGGATGGAGGTATTGATCACCCTCATAAGTTGACAAATCATCCGTCCTTGGCTGATCGTGATGCTCAGAACAAAGAAGCAAGGCAGCTTCGAGTGTTGCAGTTGCGGAAAATGCTTGATCTTCTTGTGCATGCATCCCAATGCCGTTCTTCACATTGCCAGTATCCAAATTGTCGCAAAGTGAAGGGACTCTTCCGCCATGGGATGCAATGCAAAACACGTGCCTCCGGAGGCTGTGTTCTTTGCAAGAAAATGTGGTATTTGCTGCAACTTCATGCTCGTGCTTGCAAAGAATCCGAGTGCCACGTACCACGTTGCAGAGATCTGAAAGAACATTTAAGGAGGTTGCAGCAACAGTCGGACTCTCGGAGAAGAGCTGCCGTGATGGAAATGATGAGACAGAGAGCTGCCGAAGTTGCCAACAATGCAGGATAA 5460 0.4229 MDIEGSLGRLGSNAKTLLLLFPRSRESRRGHRPSSFFLHGKRIVDRRRSGRRYFEVVFDSISQFRTTVGLLLNSRVIKCRIKRMKLQAPIPGQMSRQVPNQSGSQLPGLTQPNRNALPQTPNLGGVPRSTINMDPEFLRARTIMQEKIYDILLQRQQHPVTEVHKRRFKDFAKRLEEAMLKTATSKEEYLNLDTLESRLLNCIRRPSMNNNNQQYLQHVSSSPIGTMIPTPGMPHVVNSSMAVTSSVDASMIVTPRNNSMASPSVNSGSMFPTGGLHGNSLSRSDGLSNGYQPSSTSFSIGSGGTMSTMGAQRIASQMIPTPGFSGSNNSFMNLESSDNSGVFSSAESSMVSQPQHQKQHAGGQNNNVMQNLGGQMGSVMRSGLQQKSFAYSNGAISGGLGLIGNNRQHTNDAGFADAYVTTYANSPKHQQQHFDQNQQLPVQGEGYGLNNVDSFTSGNFYTSATSSGSMMNSQNLNSVKLPAISQTNSLINSHSNLHGMQQTAHLKSQAMNQLEKLNFQSSFTSREGLLDPQQQYLQHSQQFQQPGQYAQQQFEQSEQYAQKHFQHKLQSQQPMHLVNSNAFSQSHISSNLEGQVKSEPGVNHHIEVFSSQVSEQFNISEMQNKLQQNSTDSCSGDAQHLSFSNGQNDLSATTTQNSHQMLHPRQLVSEPENNFNCLSVGTQSKSAHINQWNSQSQGGNHMPGNMSHEQHLHMDFHKRISRQDEAQCNNLSSDGNVGQAVASRGTDPLDSNVTIKKAHRNQQRWLLFLLHARRCPAPEGRCQERYCYNAQKLCRHIDGCNQPHCSYPRCHHTRLLLIHFRNCKDQYCPVCVFVRNYRRSFQVKPQSQPDSDSGVPVAVNGSCKPYNSVVPSPRLIPKPLPVIETSDDLQPSLKRMKIEQCTKSFSSENDNSAVLANCESNVSKDALNQDYIHGDMPMSIKSEFTEVKAEGPVHSTPTNPCEVKINNAEDRWPSSEPVTYDDESFNLARPENIKPEKETGQDQPENLTQPSENLGGTKSGKPKIKGVSLTELFTPEQVREHINGLRQWVGQSKAKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCSTCGARIKRNAMYYTMGTGDTRHYFCIPCYNEARGDAIFVDGTAIPKARLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLPQSAVLGAKDLPRTILSDHIEQRLFRRLKQERQERARLQGKSYDEVPGAEALVVRVVSSVDKKLEVKQRFLEIFREENYPTEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKTVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKATKETIVVDLTNLYDHFFVSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLNQEEDGRKLNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETISPMKEDFIMVHLQHACSHCCILMVSGNRWVCNQCKNFQICDKCYEEEQKREERERHPIHHREKHTLYPHEISDVPADTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICHLDIETGQGWRCEVCPDYDVCNACYQKDGGIDHPHKLTNHPSLADRDAQNKEARQLRVLQLRKMLDLLVHASQCRSSHCQYPNCRKVKGLFRHGMQCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG 1819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0579 1819 ProSitePatterns Zinc finger ZZ-type signature. 1646 1673 IPR000433 GO:0008270
Lele40g0579 1819 MobiDBLite consensus disorder prediction 623 654 - -
Lele40g0579 1819 ProSiteProfiles Zinc finger ZZ-type profile. 1521 1584 IPR000433 GO:0008270
Lele40g0579 1819 ProSiteProfiles Zinc finger TAZ-type profile. 753 834 IPR000197 -
Lele40g0579 1819 Pfam PHD-finger 1144 1186 IPR019787 -
Lele40g0579 1819 Pfam TAZ zinc finger 763 831 IPR000197 -
Lele40g0579 1819 Pfam TAZ zinc finger 1711 1781 IPR000197 -
Lele40g0579 1819 ProSitePatterns Zinc finger PHD-type signature. 1114 1185 IPR019786 -
Lele40g0579 1819 ProSiteProfiles Zinc finger ZZ-type profile. 1641 1694 IPR000433 GO:0008270
Lele40g0579 1819 SMART zz_5 1640 1686 IPR000433 GO:0008270
Lele40g0579 1819 SMART zz_5 1520 1564 IPR000433 GO:0008270
Lele40g0579 1819 Gene3D - 1517 1578 IPR043145 -
Lele40g0579 1819 PANTHER CBP/P300-RELATED 167 503 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lele40g0579 1819 SUPERFAMILY FYVE/PHD zinc finger 1147 1187 IPR011011 -
Lele40g0579 1819 SUPERFAMILY RING/U-box 1622 1690 - -
Lele40g0579 1819 CDD PHD_HAC_like 1113 1185 - -
Lele40g0579 1819 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1203 1639 IPR031162 GO:0004402
Lele40g0579 1819 Gene3D TAZ domain 1698 1815 IPR035898 -
Lele40g0579 1819 MobiDBLite consensus disorder prediction 1002 1016 - -
Lele40g0579 1819 FunFam Histone acetyltransferase HAC1 1640 1691 - -
Lele40g0579 1819 FunFam Histone acetyltransferase HAC1-like protein 1698 1815 - -
Lele40g0579 1819 Gene3D TAZ domain 752 855 IPR035898 -
Lele40g0579 1819 SMART PHD_3 1087 1186 IPR001965 -
Lele40g0579 1819 Pfam Zinc finger, ZZ type 1643 1682 IPR000433 GO:0008270
Lele40g0579 1819 SMART KAT11_2 1236 1533 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lele40g0579 1819 FunFam Histone acetyltransferase of the CBP family 12 1517 1576 - -
Lele40g0579 1819 Pfam Histone acetylation protein 1243 1459 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lele40g0579 1819 MobiDBLite consensus disorder prediction 93 127 - -
Lele40g0579 1819 ProSiteProfiles Zinc finger TAZ-type profile. 1701 1784 IPR000197 -
Lele40g0579 1819 Coils Coil 1219 1239 - -
Lele40g0579 1819 SUPERFAMILY TAZ domain 1703 1786 IPR035898 -
Lele40g0579 1819 MobiDBLite consensus disorder prediction 987 1001 - -
Lele40g0579 1819 MobiDBLite consensus disorder prediction 93 131 - -
Lele40g0579 1819 SUPERFAMILY TAZ domain 758 838 IPR035898 -
Lele40g0579 1819 SUPERFAMILY RING/U-box 1501 1580 - -
Lele40g0579 1819 MobiDBLite consensus disorder prediction 337 363 - -
Lele40g0579 1819 SMART TAZ_2 756 834 IPR000197 -
Lele40g0579 1819 SMART TAZ_2 1704 1782 IPR000197 -
Lele40g0579 1819 MobiDBLite consensus disorder prediction 950 1023 - -
Lele40g0579 1819 Gene3D - 1640 1691 IPR043145 -
Lele40g0579 1819 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1138 1186 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0579 Lele-ChrLele40 5065732 5078185 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Lele40g0579 HAT_KAT11 1.5e-31 CL0257