Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0578 ATGGAACTGCAGGCGCACATTTCAGGTCAGGTACCTAATCAAGCAGGGTCTCAGTTGCCTGGACTGGCTGCAAATGGAAATGCCGCCCTCCCTCCTCAGATACCAAATTTAGGGGGTATTCCACGTTCAAGCATAAATGTGGACCCTGAATTTCACCGAGCACGTTTGCTTATGCAGGAGAAGATCTATGATGCGCTCTTGCAGCGGCAGCAGCATCCTGTTTCAGAACTTCATAGAAGAAAGTGTAGGGATTTTGCCAAACGCCTGGAGGAGGGCATGTTAAGATCTGCACCCTCTAAGGAGGAGCACTTGAACATGGAAACATTAGAGAGCCGTTTGGTGAATTGCATCAAGCGATCATCTACGAGTAATCATAACCAACAATATACAAGTAATCATAACCAACAATATCCCCAGATTGTCAGCTCTTCACCAGTAGGTACAATGATACCAACACCTGGCATGTCGCATGTTGTGAATTCAAGCATGGCCTCTACATCTTCTGTAGAGGCCTCAATGATTGCATCCAGTGGATGTACTAGCATAGCATCGTCATCTATCAATAGTGGAAACATGTATCTACCTGGCAGCTTGCATGGGAATTCCTTAAGTAGATCTGATGGTATGGCAAATGGCTATCAGCAGCCTTCTACCGGCTTTTCTGTTGGTTCTGGGGGAAACATGTCATCAATCGGTGGGCAGAGAATTGCAAGTCAAATGATTCCCTCTCCTGGATTCACTGGCAGCTATCACTCATACATGAATATAGAATCTTCTAATAATGGCAGTGGCTTCTCCAATGTTGATTCCACTATGGTATCACAGTCACTGCAGAAGCAGCATGTTGGTGGCCAAAATAATAGTGTGATGAAGAACCTTGGCAGCCAAATGGGTAGTGGAATGAGGCCTGGTTTACAACAAAAACCTTTTGCATACTCAAATGGAGCTATAAGTAGTGGATTAGGCTCGATTGGAAATAATATGCAAGCTGCAGATGAATCTGGAACTACTGATGGCTATGCCATAACTTATGGTAACTCCCCTAAACAATTGCAGCAGCACTTTGATCAAAATCAGCAACCACTGGTGCAGGGTGATGGTTATGGATTGAATAATGTTGACTCTTTTGCTCCTGGAAACTTTTATTCATCTGCAATGTCTAGTGGATCTATCATGAGCAGTCAGAACATGAATTCAACAAAATTGCCTGCTATATCCAAAACCAGCTCTCTGATTAGTAGTCATTCAAGTTTGCATGGTACACAGCAGGCTGCTCTTTTGAAGTCTCAAGCAATTAATCAGTTGGAGAACTTGAATTTTCAGTCTTCTTTGACTTCAAGAGATGGCCTTTTGCATCATCAACAGCAATATCAGCAACGGCCTCAACAATTTCAACAGCCAGAACAATATGAGCAACAGCAATTTCAACGCCAGCAGACTCAGCATTTGGTCAATAATGATGCTTTTAGTCAGTCTCAGGCGGCATCCAATTTAGAAAGCCGAGTGAAGTCTGAGCCTGGAGTCGAACATCATCAAGAAGTGCTTAATTCACAGGTTTCTGGACAGATTCATATTTCTGGGATGCAAAATCAGTTTCGCCAGAAATCTGCGGATGATTGCTCTAAGAATGCTCAACATCTTTCTTTTCCACCTGGTCAGAATGATTTATCCATGAGAGCCCCGCAGAATTCACAACAAATGCTACACCCTCAACATTTGACTTCACAACCTGGAAATAATTTTAGCTTGCCTTCGGTTGGGACACAGTCTGAACCTGCACTTGCAAATCAATGGAATTCTCGGTCACAAGATGTCAACCACATAACGGGGAATACATCACAAGAGCAGCTTGTCCATTCTGATTTCCATCAACGGATATCAAGGCAAGATGAAGCTCAATGCAATAATTTATCATCAGATCCATCTATTGTTGGGCAAGCTGTTGCTTCTAAAGGCTCATCTGAGCCACAAGACTTAGGTGTTGCTATAAAACAAGCACACAGGAACCAACAGAGGTGGCTTCTATTTCTGCTTCATGCCCGACGATGTCCTGCACCTGAAGGACAATGCCAAGAAAAATATTGTTATAGTGCTCAGAAGTTATGTAGACACATAGAAGGATGTGATCTAACTCATTGTCCATATCCCCGCTGTCATCATACCAGGCTGTTGCTTCGGCATTTCAGAAGCTGCAAGGATACTTGTTGTCCTGTTTGTGTCTTTGTTCGCAATTATCGATGTTCATTTAAATTTAAGTCTCATATTCAGCCAGCTAATGATTCAGGCATGCGAGTTGCTGTTAATGGATCCTGCAAATCCTATGATACCGAAGTTCCATCGCTTAGCTTGATCCCAAAGCCAGTACCTGTGATTGAAAATTCAGAAGACCTGCAGCCATCTCAAAAACGTATGAAGATTGAGCAGAGCACCCATTCCTTAAGTTCCAAGAATGACAACTCTGCAATATCATTTTCTGCGAACTGTCGTTCTGATGTTTCCAAGGGTGCTCAGTGCCAAGATCTTCCCCATTTTGAGACATCTATTCCAATTAAATCTGAGCTTATAGAGGTCAAGAAAGAAGTTCTGGTACATTTGGAAAACCAGAATCTTAGTGAAGTTAATGCAAGTAACATGGAAGGCAGAGGGCCTACTGGTGAACCTGTCACATTTAAAGATTCCGGGCCAGAAAATATTAAAACAGAGAAAGCAAGGGGACAAGATAAGCCACCAAGTGTGACCCTGCCATGTGAAAATGTGTCGGGTACCAAATCAGGTAAGCCCAAAATAAAGGGGGTCTCATTGATTGAACTATTCACTCCAGAGCAAGTCAGGGAACATATCACCGGTCTTAGGCAATGGATTGGCCAAAGCAAAGCAAAAGCAGAGAAGAATCAAGCAATGGAGCATTCAATGAGTGAGAATTCCTGTCAGTTGTGTGCTGTAGAGAAACTTACTTTTGAACCACCTCCAATTTATTGCTCAACTTGTGGTGCTCGCATCAAACGAAATGCTATGTATTATACTATGGGTGCTGGTGACACGCGACATTATTTTTGTATTCCATGCTATAATGAGGCTCGTGGAGACAGCATTGTTGTTGATGGAATGACCATTCCTAAGGGGAGGCTGGAGAAGAAGAAAAATGATGAAGAAACTGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCTTGGCAACACCAAATTTGTGCTTTATTTAATGGTCGAAGAAATGATGGGGGGCAAGCTGAATACACTTGCCCTAACTGCTATATTCAAGAGGTCAAAAGAGGAGAGCGCATACCATTACCTCAAAGTGCTGTTCTTGGGGCCAAGGATCTGCCTAGAACGATTCTGAGCGACCACATAGAGCAACGATTGTTTAGGAGATTAAAACACGAGAGACAGGAGAGGGCAAGGATTCAAGGAAAAAGTTATGACGAGGTGCCTGGGGCTGAGTCACTTGTTATAAGAGTTGTGTCATCTGTAGACAAGAAGTTAGAAGTGAAACAGCGTTTTCTGGAAATTTTTCAGGAAGAAAATTACCCAACAGAATTCCCTTACAAATCAAAGGTAGTTTTGTTATTTCAGAAGACTGAAGGTGTGGAAGTGTGTCTGTTTGGCATGTATGTGCAAGAATTTGGATCTGAATGCCAATTTCCGAATCAGCGACGAGTATATCTTTCATATCTTGATTCTGTGAAGTATTTTCGGCCTGAGGTTAAAGCAGTGACTGGAGAGGCTCTTAGGACATTTGTTTACCATGAAATTCTGATCGGATACCTTGAATATTGCAAGAAACGTGGTTTTACAAGTTGTTATATCTGGGCATGTCCTCCATTGAAGGGTGAAGATTATATATTGTATTGTCATCCCGAAATTCAAAAAACGCCAAAATCGGATAAACTTCGAGAATGGTACCTTTCAATGTTACGAAAAGCTGCCAAGGATGATATTGTGGTCGATCTCACAAACTTGTATGACCATTTCTTTGTATCTACTGGTGAATGTAGAGCAAAGCCACTGTTGCATTTTAATGGTGTCTGGCAACCGTTGGCTATGCACAGTCATGCTGTTGTTGAAGGGAATAGTATCACTGTAAAGCATAGCCATAAACAAAAACGTGAAGAAAGAGAAAGGCATCCTATAAATCAGAGGGAGAAACATTCTCTTAACCGAATTGAAATTACTGATGTACCAGATACAAAGGACAGAGATGAGATTCTTGAGAGTGAATTTTTTGACACTAGACAGGCATTTCTGAGTCTCTGCCAGGGAAACCATTATCAATATGATACTCTAAGGCGGGCCAAGCATTCGTCAATGATGGTCCTTTATCATCTCCATAATCCAACTGCTCCTGCCTTTGTGACAACCTGTAATAAATGCTATCTTGACATAGAAACTGGTCAAGGTTGGCGATGTGAAGTTTGCCCTGAGTATGATGTGTGCAATACGTGTTATCAAAAGGATGGAGGTATTGATCACCCTCATAAGTTGACAAATCATCCATCATTGGCTGATCGTGATGCCCAAAACAAAGAAGCGAGACAGCTTCGAGTGTTGCAGCTACGGAAAATGCTTGATTTGCTTGTGCACGCTTCTCAATGTCGTTCTCCACATTGCCAGTATCCCAATTGTCGAAAAGTGAAGGGGCTTTTCCGCCATGGAATCCAATGTAAAACACGTGCATCTGGGGGTTGTGTTCTTTGCAAGAAAATGTGGTATTTGCTTCAACTTCACGCTCGAGCTTGCAAAGAATCCCAGTGCCATGTACCCCGATGCAGAGATTTAAGAGAACATCTAAGGAGGTTACAGCAGCAGTCTGACTCTCGGCGTAGAGCAGCTGTAATGGAGATGATGAGACAGAGAGCAGCAGAAGTTGCCAACAATGCAGGATGA 4902 0.4255 MELQAHISGQVPNQAGSQLPGLAANGNAALPPQIPNLGGIPRSSINVDPEFHRARLLMQEKIYDALLQRQQHPVSELHRRKCRDFAKRLEEGMLRSAPSKEEHLNMETLESRLVNCIKRSSTSNHNQQYTSNHNQQYPQIVSSSPVGTMIPTPGMSHVVNSSMASTSSVEASMIASSGCTSIASSSINSGNMYLPGSLHGNSLSRSDGMANGYQQPSTGFSVGSGGNMSSIGGQRIASQMIPSPGFTGSYHSYMNIESSNNGSGFSNVDSTMVSQSLQKQHVGGQNNSVMKNLGSQMGSGMRPGLQQKPFAYSNGAISSGLGSIGNNMQAADESGTTDGYAITYGNSPKQLQQHFDQNQQPLVQGDGYGLNNVDSFAPGNFYSSAMSSGSIMSSQNMNSTKLPAISKTSSLISSHSSLHGTQQAALLKSQAINQLENLNFQSSLTSRDGLLHHQQQYQQRPQQFQQPEQYEQQQFQRQQTQHLVNNDAFSQSQAASNLESRVKSEPGVEHHQEVLNSQVSGQIHISGMQNQFRQKSADDCSKNAQHLSFPPGQNDLSMRAPQNSQQMLHPQHLTSQPGNNFSLPSVGTQSEPALANQWNSRSQDVNHITGNTSQEQLVHSDFHQRISRQDEAQCNNLSSDPSIVGQAVASKGSSEPQDLGVAIKQAHRNQQRWLLFLLHARRCPAPEGQCQEKYCYSAQKLCRHIEGCDLTHCPYPRCHHTRLLLRHFRSCKDTCCPVCVFVRNYRCSFKFKSHIQPANDSGMRVAVNGSCKSYDTEVPSLSLIPKPVPVIENSEDLQPSQKRMKIEQSTHSLSSKNDNSAISFSANCRSDVSKGAQCQDLPHFETSIPIKSELIEVKKEVLVHLENQNLSEVNASNMEGRGPTGEPVTFKDSGPENIKTEKARGQDKPPSVTLPCENVSGTKSGKPKIKGVSLIELFTPEQVREHITGLRQWIGQSKAKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCSTCGARIKRNAMYYTMGAGDTRHYFCIPCYNEARGDSIVVDGMTIPKGRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVKRGERIPLPQSAVLGAKDLPRTILSDHIEQRLFRRLKHERQERARIQGKSYDEVPGAESLVIRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVVLLFQKTEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKAAKDDIVVDLTNLYDHFFVSTGECRAKPLLHFNGVWQPLAMHSHAVVEGNSITVKHSHKQKREERERHPINQREKHSLNRIEITDVPDTKDRDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNKCYLDIETGQGWRCEVCPEYDVCNTCYQKDGGIDHPHKLTNHPSLADRDAQNKEARQLRVLQLRKMLDLLVHASQCRSPHCQYPNCRKVKGLFRHGIQCKTRASGGCVLCKKMWYLLQLHARACKESQCHVPRCRDLREHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG 1633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0578 1633 Pfam Histone acetylation protein 1148 1316 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lele40g0578 1633 SMART zz_5 1454 1500 IPR000433 GO:0008270
Lele40g0578 1633 SUPERFAMILY FYVE/PHD zinc finger 1052 1092 IPR011011 -
Lele40g0578 1633 ProSiteProfiles Zinc finger ZZ-type profile. 1455 1508 IPR000433 GO:0008270
Lele40g0578 1633 Pfam Zinc finger, ZZ type 1457 1496 IPR000433 GO:0008270
Lele40g0578 1633 Gene3D TAZ domain 1512 1629 IPR035898 -
Lele40g0578 1633 ProSitePatterns Zinc finger PHD-type signature. 1019 1090 IPR019786 -
Lele40g0578 1633 SMART KAT11_2 1141 1407 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lele40g0578 1633 SMART TAZ_2 665 742 IPR000197 -
Lele40g0578 1633 SMART TAZ_2 1518 1596 IPR000197 -
Lele40g0578 1633 MobiDBLite consensus disorder prediction 453 474 - -
Lele40g0578 1633 Gene3D - 986 1046 IPR038547 -
Lele40g0578 1633 Gene3D - 1454 1505 IPR043145 -
Lele40g0578 1633 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1108 1453 IPR031162 GO:0004402
Lele40g0578 1633 PANTHER CBP/P300-RELATED 430 1624 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lele40g0578 1633 Pfam TAZ zinc finger 1525 1595 IPR000197 -
Lele40g0578 1633 Pfam TAZ zinc finger 671 739 IPR000197 -
Lele40g0578 1633 SUPERFAMILY TAZ domain 1517 1599 IPR035898 -
Lele40g0578 1633 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1047 1091 IPR013083 -
Lele40g0578 1633 SUPERFAMILY RING/U-box 1436 1504 - -
Lele40g0578 1633 Pfam PHD-finger 1049 1091 IPR019787 -
Lele40g0578 1633 ProSiteProfiles Zinc finger TAZ-type profile. 1515 1598 IPR000197 -
Lele40g0578 1633 ProSitePatterns Zinc finger ZZ-type signature. 1460 1487 IPR000433 GO:0008270
Lele40g0578 1633 MobiDBLite consensus disorder prediction 875 924 - -
Lele40g0578 1633 FunFam Histone acetyltransferase HAC1-like protein 1512 1629 - -
Lele40g0578 1633 ProSiteProfiles Zinc finger TAZ-type profile. 661 742 IPR000197 -
Lele40g0578 1633 Gene3D TAZ domain 661 746 IPR035898 -
Lele40g0578 1633 SUPERFAMILY TAZ domain 667 745 IPR035898 -
Lele40g0578 1633 MobiDBLite consensus disorder prediction 533 567 - -
Lele40g0578 1633 FunFam Histone acetyltransferase HAC1 1454 1505 - -
Lele40g0578 1633 CDD PHD_HAC_like 1018 1090 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0578 Lele-ChrLele40 5035354 5047572 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Lele40g0578 HAT_KAT11 9.8e-30 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0578 40 5035354 5047572 Lele40g0578 40 5035354 5047572 ECH
Lele37g0660 37 5718164 5728814 Lele40g0578 40 5035354 5047572 hybridization
Lele38g0613 38 5241858 5254168 Lele40g0578 40 5035354 5047572 hybridization