Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0573 ATGTGTGACTCATTGGTTATGCCATCTGCACTGAGACGACGCGATTCTTCATCTGAATATTCACGTCCTGGCACAAGTTATTGTGATTCAGAATTTAAAGTTGGTGTTCTGAGTGAGCTTCATTGTGGTGACTTATCCATAAAGGTGAGAAATGTTACGGAAGACACAGGAAGAAATGTGTCACATGAACAAGGAAACAGTGCTGCTCTCAGCAGATTTCAACTTGAACAGGATGTGCAACAATTAGAAAACCAGCTGCAAGGAGAGCTGGAACTTCATGCATTCCTTGAAAATGTAATTGAGAGAAATGTCGTCAAATTATCTGGTCCAGCAAATCTCCCTTATCATGTTCAAGAGCTCCTTTCAAATATTGCCCAATTGGAAGGTACAATCTCAAAACTTGAAAATGAGATAGTATCTTTGCATTTCCAACTCAGTCAAGAAAGAAATGAACGGAGACTTGTGGAGTATCGTTTGAGACATTCATCTTCTCAATCAACATCTCTTTGTTCGTCAGAAATTTTGAGTACTCCGATGTCATCTTCTTCAAGGTCTTCAAATCAATTTGATTGTGAAGGACTTCAGCTTTCTGAAAGTTGCAATCACCAACTGCAAAAAGCTCAGTCATCTAAGCATTATTGCGAAGGCGAAGAGCCAATGATGGAGAATGCCGTGCGCTCAGTTTTGTTTTGCTATGAAAAAAGTGAGTCTACGGAGATAGATGGCAAATATTGTCAGCCTGAAGATTTCAGGAAGCTTCCTAAAGGGATGCCACTGAAGGAACTTTGGAATCAACCCAATTCATTATCAGAAGAAATGGTTAGATGTATGAAAAACATATATATCTCTCTTGCAGATTCTGATATATCTATGAAGTCATTTATAGGAGAGAGTCCGCACTCAACTCATTCACCATGTGAACACCTACCTAATTCGTTGAGGTGGTCATCTGAGCACTCAACAACCTCATCATGGGTGCAGAGCCCACTAGATGTAAAGGATTGTGATGTATTGGCTTCTGGGAATGCTTGTGATCCCTATCATGTTCGTGGTAAATTGAGTTGGGCTGATATTGGAAGTTATGGATCAGCAATTGAAGTTTCTTGGATGTCAGTGGGGAAAAAGCAATTAGAATATGCTTCATGCGCACTACGGAGGTTTAGATTGCTCGTTGAACAATTGGCCAAAGCAAATCCGATCCATTTGAACTCCAGTGAGAAACTTGCTTTCTGGATCAATTTGTATAACACATTAATCATGCATGCTTATTTGGCTTATGGAGTCCCAAGAAGTGATTTAAAACTCTTTTCTTTGTTGCAAAAGGCTGCATATACTGTTGGGGGTCATTCTTTCAGTGCAGCTGCAGTTGAGTATGTGATTCTGAAGATGAAACCGCCACATCATAGGCCTCAGATAGCTTTGCTTCTTGCTGTTCTAAACTTAAAGGTGTCAGAGGAGCAAAGGAAGTTTGCAATTGATAAACACGAGCCTCTAGTGGCTTTTGCTCTCAGCTGCGGAATGTATTCTTCACCCGCGGTAAGGATTTATACATCTAAAAACGTGAGGGAAGAGCTTGAAGGTGCTCAGCGTGATTACATTCGTGCAGCCGTGGGAGTGAGCGACAAGGGGAGATTGTTGGTGCCCAAAATGCTTCACTGCTTCGCCAAAAGTTTTGTGGATGATGCAAGTTTGGCTGTTGAACCAAAATCTAGTCAAATTTATACTTGTGTCACTCTGCTTTCTGATACAGAAAGTGATCCAACAATTCCAGATCCAACCCAACCTGAAATACAAAAACATGAGATCCTTTCAATTTGCAAAATATTAACGGCCTCTGTTACTGGCACACATGGACTTCCTTCATCTGTGATTTCAAACGAGGGTATGCATCTTGGAGTAATTAGAACTGCATCACATGCAGTCATGACTGGCACTATGTTTTGTGGTCTATTGCAAACAAAGGTTAGGGCCAGCCAGTTTGTCATTCGCTTGAACAAATATCTAGAGGCAGTGAACAATAACGTTCATATTGGTCCGAGGTTTAGGATGGGATTTCAGAGAGAGGACTCACATGAGAGAAGTTTCTTCGGCACTATTGTTCGAACCTCGGATTGCTCTCCCAAATGGCCAGATTTTGATTAG 2142 0.4113 MCDSLVMPSALRRRDSSSEYSRPGTSYCDSEFKVGVLSELHCGDLSIKVRNVTEDTGRNVSHEQGNSAALSRFQLEQDVQQLENQLQGELELHAFLENVIERNVVKLSGPANLPYHVQELLSNIAQLEGTISKLENEIVSLHFQLSQERNERRLVEYRLRHSSSQSTSLCSSEILSTPMSSSSRSSNQFDCEGLQLSESCNHQLQKAQSSKHYCEGEEPMMENAVRSVLFCYEKSESTEIDGKYCQPEDFRKLPKGMPLKELWNQPNSLSEEMVRCMKNIYISLADSDISMKSFIGESPHSTHSPCEHLPNSLRWSSEHSTTSSWVQSPLDVKDCDVLASGNACDPYHVRGKLSWADIGSYGSAIEVSWMSVGKKQLEYASCALRRFRLLVEQLAKANPIHLNSSEKLAFWINLYNTLIMHAYLAYGVPRSDLKLFSLLQKAAYTVGGHSFSAAAVEYVILKMKPPHHRPQIALLLAVLNLKVSEEQRKFAIDKHEPLVAFALSCGMYSSPAVRIYTSKNVREELEGAQRDYIRAAVGVSDKGRLLVPKMLHCFAKSFVDDASLAVEPKSSQIYTCVTLLSDTESDPTIPDPTQPEIQKHEILSICKILTASVTGTHGLPSSVISNEGMHLGVIRTASHAVMTGTMFCGLLQTKVRASQFVIRLNKYLEAVNNNVHIGPRFRMGFQREDSHERSFFGTIVRTSDCSPKWPDFD 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0573 713 Gene3D - 674 713 - -
Lele40g0573 713 Pfam Auxin response factor 637 711 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele40g0573 713 Pfam Leucine-zipper of ternary complex factor MIP1 71 148 IPR025757 -
Lele40g0573 713 PANTHER UNCHARACTERIZED 61 564 - -
Lele40g0573 713 Pfam Protein of unknown function, DUF547 401 533 IPR006869 -
Lele40g0573 713 Coils Coil 117 151 - -
Lele40g0573 713 Coils Coil 72 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0573 Lele-ChrLele40 4956863 4969137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0573 619 710 B3 DNA Binding Superfamily AT3G61830 52.174 1.72e-22 100