Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0571 ATGGGCGCGCACGCCGCCTTGCCTGTGCGCGTTCCGGCAGCAACTTCTGATCTTCTTGTCTTTCTTCTACCTTTTCTTCTTCTTCTTCTTCTTTTGTCGTCGTCTCCTTCGTTGTCCTACTCTGATGCCGAAGCCCTCTTGAAGTTTAGAAGCTCCCTCAACGATGTTGTCGGTCTCAGGAATTGGGATCCCGTTGTCAACCCTAAGCCGCCATGCACCGGCAATATTCCAAATTGGGTCGGCATTTTCTGCATCAACGACTCCGTTTGGGGCTTCCGTCTCGAGAATATGGGCCTCATGGGAAACATTGACGTGGATGCTCTTGCTTCCATGCCCCGTTTAAGGTCTATTAGCTTGATGAATAATTCCTTCGTCGGACCTTTGCCTGAAATCAAGCGCGTGAAGAATTTGAAGTCCATTTACTTATCGTACAACCATTTCTCCGACAACATCCCCGATGATGCATTTGTAGGTATGAATATGTTAAAGAAAGTTTATTTGGCAAATAACCAGCTCACCGGAAAAATCCCTTCCTCCCTCGGCGTCTTGCCTAATCTACTCGCCGTCCGGCTTGACGGCAACAAGTTTCATGGCCGAATCCCTAATTTTCAAAACAGCACGTTGAAGCTTATCGATTTGTCTAACAATAATTTAGAGGGCCCCATTCCACAGAATCTTACCTCTTTCAACGCCTTCGCCTTCTCAGGGAACTCACATTTATGTGGTCCTCCTCTGCGGAATCCATGCCCCATCCCTTACGCTACCATGGATTCTCAATCAAAGGCAGCGATTCTAAGGATCCTGTTTATTTTACTTCTCACATTCCTGATCATAGTGATAATTGTTTCGGCGATCGTGATAGCCCGCCTGAGAACTCGCCGGCGATACGGCGACGTCTCGGTCTCGACTTTCCAAAGCCAACCTTCTTTGAAGTACGCTGCTCCGGCATTAACCAAAGCGAAAAGCATAGTCGATCACCATGACAGCACAAAGATTCTTGCTGAACAAAACAATAGTTATCAGCATACGCCGTCGACGAAGAAAGGCGAAGCCGGGAAGTTGATATTTGTGAGGAACCTTGAGAAGAAGTTTGACTTGCAGGATTTGTTGAAGGCATCGGCGGAGATTCTGGGGAGTGCTGCGTTTGGATCTTCATATAAAGCTGTGATGAAGGAAGATCAAGCGGTGGTGGTGAAGAGGTACAAGCAGATGAACAATGTTTCGAAAGATGAGTTCTTTGAACACATGGCAAGGCTTGGTGATCTCTCTCATCCGAATCTTCTTCCTCTCGTTGCTTACTATTATAGAAAAGAAGAAAAACTCTTGCTCTCTGACTTCGTTCAAAAGGGTTGTTTGGCCAGCCATCTCCATGGTAATCATAGCGAGGAGCAGCCATGCTTAAACTGGCCTACTCGTTTGAAGATTGTAAAAGGCGTAGCAAGGGGTTTATCATACCTATACACTGCATTACCAAGCTTAGTGGTTCCTCATGGTCATTTGAAATCTTCAAACATTCTCTTAGACGAATCATACGAGCCCTTACTCACAGATTATGCTCTCATTCATGTCATTAATCTGGATCATGCTCAACAGATCATGATGCCCTACAAGTCGCCGGAGTATGCACAACTCGGCCGGATAACAAAGAAGACCGATGTATGGAGCTTCGGCATTGTTATTCTCGAGATCTTAACGGGGAAGTTCCCGGAGAACTATCTGACTCAGAGGCACGAACCTGGTTCGGACATAGCCAGTTGGGTGAATAGTATGATCACGGAGAAGCGTACGAGTGAGGTGTTTGATGTTGAAATGGGAGCGATTGAGAATAGTAAGAGTGAATTGCTTAAGCTTTTGAAGATTGGACTGAGTTGTTGTGAGGAGAATGTGGAGAGAAGATTGGACATGAAAGAAGCTCTTGATAAGATTGAAGAGTTGAAGGATGAGAATGTTGGAGAGTTTTCTTTGTCTGTCACTGGTGAACGCTATACTTTTCAAGTTATATAA 2004 0.4551 MGAHAALPVRVPAATSDLLVFLLPFLLLLLLLSSSPSLSYSDAEALLKFRSSLNDVVGLRNWDPVVNPKPPCTGNIPNWVGIFCINDSVWGFRLENMGLMGNIDVDALASMPRLRSISLMNNSFVGPLPEIKRVKNLKSIYLSYNHFSDNIPDDAFVGMNMLKKVYLANNQLTGKIPSSLGVLPNLLAVRLDGNKFHGRIPNFQNSTLKLIDLSNNNLEGPIPQNLTSFNAFAFSGNSHLCGPPLRNPCPIPYATMDSQSKAAILRILFILLLTFLIIVIIVSAIVIARLRTRRRYGDVSVSTFQSQPSLKYAAPALTKAKSIVDHHDSTKILAEQNNSYQHTPSTKKGEAGKLIFVRNLEKKFDLQDLLKASAEILGSAAFGSSYKAVMKEDQAVVVKRYKQMNNVSKDEFFEHMARLGDLSHPNLLPLVAYYYRKEEKLLLSDFVQKGCLASHLHGNHSEEQPCLNWPTRLKIVKGVARGLSYLYTALPSLVVPHGHLKSSNILLDESYEPLLTDYALIHVINLDHAQQIMMPYKSPEYAQLGRITKKTDVWSFGIVILEILTGKFPENYLTQRHEPGSDIASWVNSMITEKRTSEVFDVEMGAIENSKSELLKLLKIGLSCCEENVERRLDMKEALDKIEELKDENVGEFSLSVTGERYTFQVI 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0571 667 Gene3D Phosphorylase Kinase; domain 1 336 446 - -
Lele40g0571 667 FunFam pollen receptor-like kinase 1 340 446 - -
Lele40g0571 667 Coils Coil 628 648 - -
Lele40g0571 667 Pfam Protein tyrosine and serine/threonine kinase 375 640 IPR001245 GO:0004672|GO:0006468
Lele40g0571 667 Gene3D Ribonuclease Inhibitor 41 158 IPR032675 -
Lele40g0571 667 ProSiteProfiles Protein kinase domain profile. 371 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0571 667 Gene3D Ribonuclease Inhibitor 159 251 IPR032675 -
Lele40g0571 667 SUPERFAMILY L domain-like 69 246 - -
Lele40g0571 667 Pfam Leucine rich repeat N-terminal domain 41 84 IPR013210 -
Lele40g0571 667 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 27 649 - -
Lele40g0571 667 Pfam Leucine rich repeat 136 196 IPR001611 GO:0005515
Lele40g0571 667 SUPERFAMILY Protein kinase-like (PK-like) 375 645 IPR011009 -
Lele40g0571 667 FunFam Pollen receptor-like kinase 1 447 655 - -
Lele40g0571 667 Gene3D Transferase(Phosphotransferase) domain 1 447 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0571 Lele-ChrLele40 4893208 4896189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0571 26 647 Receptor kinase-like Gene Family AT5G35390 49.211 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele40g0571 PK_Tyr_Ser-Thr 4.4e-30 CL0016