Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0564 ATGGCAGATTCTACATCTAGATGGGCAGAAGCATTGCTTGAAATCTCTGGACGGCTGGCAGAAATGCCTGCAGATAGTGGATATCCTGCTTACCTTGCTGCACGTTTAGCTTCTTTTTATGAACGTGCTGGAAAAGTCAATGGCTTGGAGACCCCGAATCATAGTTCAGGTCTTCTGGGGTTTGGACAAAAAGCTAGCCCAGAGGAAGCATTTTCCTTCTGTGAACTGGCTTATTTCCTATTCGAAGCATTGGAATCCTTCTATGAGCAATTTGATCCAGATTCCATAAACATTAGAACAAAGGCTCGTGAAGTGCTACAGAGAGAAGATGACCTCAATGAAATTGTCCAGCTTGTAGGCAAGGACGCTTTAGCTGAAGGAGACAAGATCACATTAGAAACTGCAAAGCTTTTGAGAGAGGATTATCTTGCTCAGAGTGCTTTTACTCCATATGACAAATTCTGCCCCTTCTATGAATCTGTTTGGATGATGCGCAACATAATCCATTTCTACAATTTGGCAAATCAGGCAGTGGAGAGGGGAGCTGGTACAGATGGTCAAAAGATAACTTACACCCTCATCAAGCATCGTTTGGGTGATCTCTTCTACCGTCTAGTGTCGCAGAAATTTGAGGATCCAGCAGAAGGTGAAGCAGCTCTGGTTGATAAATTTAAGAAGCTTCATGAGGACCTGACCAATGGTTTCCGCAATCTTGATGAAACCCGGTAG 729 0.4376 MADSTSRWAEALLEISGRLAEMPADSGYPAYLAARLASFYERAGKVNGLETPNHSSGLLGFGQKASPEEAFSFCELAYFLFEALESFYEQFDPDSINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQSAFTPYDKFCPFYESVWMMRNIIHFYNLANQAVERGAGTDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEAALVDKFKKLHEDLTNGFRNLDETR 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0564 242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 48 IPR027417 -
Lele40g0564 242 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 1 55 IPR022878 GO:0046034|GO:0046961
Lele40g0564 242 Gene3D - 1 58 IPR027417 -
Lele40g0564 242 CDD ATP-synt_V_A-type_alpha_C 98 201 - -
Lele40g0564 242 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 91 174 - -
Lele40g0564 242 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 1 47 IPR000194 GO:0005524
Lele40g0564 242 Gene3D - 81 241 IPR024034 -
Lele40g0564 242 FunFam V-type proton ATPase catalytic subunit A 79 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0564 Lele-ChrLele40 4796899 4799179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0564 1 242 Primary Pumps ATPases(2) AT1G78900 72.263 1.14e-129 378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele40g0564 40 4796899 4799179 Lele40g0564 40 4796899 4799179 ECH
Lele37g0630 37 5264830 5270984 Lele40g0564 40 4796899 4799179 hybridization
Lele38g0595 38 5008146 5009678 Lele40g0564 40 4796899 4799179 hybridization