Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0554 ATGAAGCCAAGGATTTGTGAGTTGTGTAGTGAGCAGGCGTACCTGTATTGTGGTTCTGATTCTGCGTTTTTGTGTTCGAAATGTGATGTTAAGGTTCATGATGCCAATTTCCTAGTTGGTCGTCATATTCGAGATATTCTTTGCTGCAATTGTATGTGTTTCGCCGGAAAGCAGATCTCCGGTAGTGTGGCTCCGTTTGAAACCGTAACCTGTAAGTCTTGTTCGCCGGAGAATCCCTCCGATGAGGATGATTGTTTGTCTTCATCATCCATGTCGGCTTGCGTTGCAAGCACCGAGTCCTGTGCGACAGGTCCGAAGAAGATTCCTCGTCCGACGGAGACGGTGGTGTCTTCAGGTTCCGTCACGGATGACAAGAAGTGCCCGGCGGAAGGGAAGAAGAATCCGGTACGGTGTCCAGCGGAGGAGGTTTTCACGAACTGGAGCAGAAAGCTAGGGGTAAATGGAAACTGCGTGGCGGCGTTGGCATCGCCGGCGCTGGGGAAGCTAATGGCGGTGGTTCCGTTCAGAGTGGCGGTGGCGACGGTGTTTTGGTTCGGGCTGAGATATCGCGGTGACGGGCAGTTACGTACGGCTCAGAATTTGAGAAAGTTAGAGGAAATGTCTAAAGTGCCAGGCAAGGTGATCATGGCGGCGGAGCAAAAGCTGACACGTGCCCTAAGACCCAAAAGAGCGAGGCGCCAATTCGAAGAAGGATGGGCCGAGTGCTAA 729 0.524 MKPRICELCSEQAYLYCGSDSAFLCSKCDVKVHDANFLVGRHIRDILCCNCMCFAGKQISGSVAPFETVTCKSCSPENPSDEDDCLSSSSMSACVASTESCATGPKKIPRPTETVVSSGSVTDDKKCPAEGKKNPVRCPAEEVFTNWSRKLGVNGNCVAALASPALGKLMAVVPFRVAVATVFWFGLRYRGDGQLRTAQNLRKLEEMSKVPGKVIMAAEQKLTRALRPKRARRQFEEGWAEC 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0554 242 ProSiteProfiles Zinc finger B-box type profile. 1 46 IPR000315 GO:0008270
Lele40g0554 242 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 5 100 - -
Lele40g0554 242 CDD Bbox1_BBX-like 5 44 - -
Lele40g0554 242 MobiDBLite consensus disorder prediction 101 132 - -
Lele40g0554 242 Pfam B-box zinc finger 2 34 IPR000315 GO:0008270
Lele40g0554 242 SMART bboxneu5 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0554 Lele-ChrLele40 4693665 4694393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0554 5 241 C2C2-CO-like Transcription Factor Family AT3G21150 32.932 2.60e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele40g0554 zf-B_box 1.2e-06 No_clan