Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0545 ATGGAATTGTTTATTGGAGTTTTTGCCATTAAGAAGGTTAAATTTGGACAAAGCAATAGGAGGAAAGTAAACATGATCAGAGAAATTGAAATGACTAGGAAGATTAGGCACCAAAATGCGGCAAGATGCTTAAGCTCCTGGATAGGTGAGGAATATGGTCTAACCATTAGCAGGTACATGGAAAATGGAAGCCTTCATGATGTTTTACATGAAAACGATCCACTAACATGCTATTAGATTGCATATGTGATAGAGCCGAGCAGTGAGCTTGATGTATATAGTTATGGGGTAGTGTTGCTTGAGCTGATAACCGGAAAGAAAGTACTAGATTCCTTATTTGTGAAGGAGGAAACCACTTTAGTAGGTTGGTTTAAATCTGTATCAAGGAGAACAAGAGAACTTGAAGAGATTGTTGTTTCAAGCATTGCAAGGGAGCTTTCAGATATGAACGTAATAGTGCGAGTTATCAAAGTGCTTTTGGTGGCTTTAATATGTACTCAAAAAGACCCAAGAAAGAGACTGAAAATGTTAGATGCTGTTGAATTCTTTGAGACAGCCACAGATCCAGGTAAGATTTGTGTACTTTTGTTCGGCATGATGGAGCTCAATATCATTTGGGAGTTTTCCTCTCTACTGCTGGGGCCTTCTCATTCAGGCCGAGTTTGTGCTGAAAGGAGGAAGGTTACGTTCACTAGGAACAAAAGCAATATGTTAAGCATGGTTAGTGAAATAGAAATCCTTGAAAAGATTAGGCACCGACATATAGTCGGAAGGCTAGAGTATTCGCTTAGAGAAGGCTATGATATAATCTGGTACGAGCACATGCCAAATGGAAAACTTCATGATGTTTTGCATGAAAAGAATCCACCTCCATCCCTGAAATGGAATGTCCGTTATAAGATGGCAACTGGAATTGCTCATGTATTAGCCTATCTTTATGATTGTGATCCTGTCATTGTGCATGGTGCCATCAAACAAAGAAATGTACTTTTAGATTCTGATATGGAGCCTCATGTTGAGGATTTCGGTTTTGCCCAGTTTTTGGATCAATCTTCTTCAACACCATCTTCGTCTGTTCCCGGCAGACTAGGATATATTACTCCATTTGATACATTTCTGGAGGGAATTGAGGCAGGGCACTTATGGGTGAGAACTGTGTTGAGGCAAATAGGAGTTATTAGTACAATTGTCGATGCGAGCCTTGCAGAGGAAGTTGTGAATCCACTTGTATTTGCCAAAGTGCTTGTGCTGGCTCTAAGTTGCACAGAGAAGGATCCATACGTGAGACCCACAACGAGGGACGTTATCAAGCAATTTTAA 1320 0.4023 MELFIGVFAIKKVKFGQSNRRKVNMIREIEMTRKIRHQNAARCLSSWIGEEYGLTISRYMENGSLHDVLHENDPLTCYXIAYVIEPSSELDVYSYGVVLLELITGKKVLDSLFVKEETTLVGWFKSVSRRTRELEEIVVSSIARELSDMNVIVRVIKVLLVALICTQKDPRKRLKMLDAVEFFETATDPGKICVLLFGMMELNIIWEFSSLLLGPSHSGRVCAERRKVTFTRNKSNMLSMVSEIEILEKIRHRHIVGRLEYSLREGYDIIWYEHMPNGKLHDVLHEKNPPPSLKWNVRYKMATGIAHVLAYLYDCDPVIVHGAIKQRNVLLDSDMEPHVEDFGFAQFLDQSSSTPSSSVPGRLGYITPFDTFLEGIEAGHLWVRTVLRQIGVISTIVDASLAEEVVNPLVFAKVLVLALSCTEKDPYVRPTTRDVIKQF 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0545 439 Gene3D Transferase(Phosphotransferase) domain 1 211 377 - -
Lele40g0545 439 ProSiteProfiles Protein kinase domain profile. 113 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0545 439 Gene3D Transferase(Phosphotransferase) domain 1 84 191 - -
Lele40g0545 439 SUPERFAMILY Protein kinase-like (PK-like) 7 187 IPR011009 -
Lele40g0545 439 PANTHER OS01G0253100 PROTEIN 87 185 IPR045271 -
Lele40g0545 439 Pfam Protein tyrosine and serine/threonine kinase 9 73 IPR001245 GO:0004672|GO:0006468
Lele40g0545 439 Gene3D Transferase(Phosphotransferase) domain 1 6 83 - -
Lele40g0545 439 Pfam Protein kinase domain 232 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0545 439 SUPERFAMILY Protein kinase-like (PK-like) 219 437 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0545 Lele-ChrLele40 4609725 4612726 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0545 7 74 Receptor kinase-like Gene Family AT1G73080 39.706 2.24e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele40g0545 Pkinase 1.6e-16 CL0016