Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0543 ATGCTTCAATTATTATTGATCATATGCTTGTCTGCTCCGTTATACGCTGCTTCTGCATTGAATTCAGATGGGTTAACTCTATTGTCTCTTCTCAGCCATTGGACTTCTGTGCCTCCTTCCTTAAATTCTAGCTGGAATTCCTCTGATTCCATCCCTTGCTTATGGACAGGAATACAATGCGACAAGTATAGCAAGGTGATCTCCCTAAACCTCACTGCTTACAGTATTTTTGGTAACCTCGGACCAGAAATTGGGCAGTTGACTCATTTGCGGAACCTTGTGTTGGTTGCAAATGGTTTCTCAGGAACAGTACCTCTAGAATTGGGAAACTGTAGTTTGCTCGAGTATATGGACCTTTCTGATAACTGCTTCAGTGGAAATATACCTCCAGAAATTGGCAACTGCAAATCTTTGATGAAGTTACATCTATACTCCAATCAACTGGGCGGAACAATTCCAAATGAATTGGGAGGCTTGAGTAAACTGGAGGACCTTGAACTGTACTCCAACCATTTGACAGGTGAACTTCCACTTACCATTTGGAAGATTCAAAATCTTAAGCATGTCCTTCTTCACAATAATAGCCTTTCAGGGAAATTACCTTCTGAGATGACAGAGCTCAAGCATCTGAAAAATATCTCATTGTTTGACAACCAGTTCTTTGGATCAATCCCTCAAAACTTGGGAATCAATAGCAGTTTGGTGAAGTTGGAGTTGATGAATAATAAGTTTACCGGTGACATACCTCCAAATCTTTGTTTTGGAAAGCAACTTCACACACTGAGTTTAGGTCTCAATCAACTTCAAGGGGGCATACCTCAAGATTTGGGAAGATGTGCAACTCTTGGGAGGTTGGTTCTCAATGAAAATAATCTTTCTGGGTCTCTTCCTGAATTTGAAGGTAATCACAATCTCATATACATGGACATGATCAAGAACAACATCAGTGGAGTAATTCCATCAAGTTTGGGAAACTGCACTAGTCTCACAGCACTAATTTTGTCCATGAATAACATAACAGGGAATATACCCTTGGAGTTAGGAAATCTTGTGAACCTTCATGCTCTGAATCTTTCTCACAACAACCTAGAAGGTCCTTTGGCACGACAGCTGTTATACTGTACCAAAATGTTGACATTTGATGTCGGATTCAATTTTCTCAATGGTTCATTCCCATCAAGCATGAGGAGCTGGACAGGGTTAACCACATTAGTTTTAAGAGAGAATCGTTTTAGCGGAGATATCCCATCTTTCTTATCAGAATATGAGCAGCTTCTTGAGCTACAACTTGGAGGAAATATGTTTGTGGGGAAAATTCCTGCATCAATTGGATCATTGCAGAATCTTTTATATGGTTTGAATCTGAGCTCTAATAAATTAACAGGTGAGATCCCCTTAGAAATTGGGAAGTTGCAAAAGCTGCAAAGCCTAGATATATCCCTGAACAATTTGACAGGGAGCTTATGTGTTCTTGGTGAACTTTCTTCATTAACAGAAGTCAATATATCATACAACTCATTTGTTGGTCCTTTACCAGAATGGAAAACGCAACTTCTGAATTTATCTTCATCATTAGTCATGGGCAATCCTGGTCTTTGTGTCCTTTGTTCAACCTCAAATGGCCCCAGTTGCATAAATTTTAGCCTCTTGAAGCCAGGTGACTCTGAATCAACTAACCACAACGGCAGTAGACATTCAATTTTATTTATAGCAGTTGGATTTGTAGGGTTTGTCATCTTTTTGTCAGGAATACTACTAATTTATTACCATCATTCTAGACAAAGATCTAATGAGGAGGTCCTTACTTATCCTAATGAGCAAATTTACATACACAAAATGGGTCAAAGATCTGAACTTAAGGCCAATTTTGCTGATTACAAACTTCAGGAGGCTTCATATTCAAACGATGAAGTAGATTTCAGAATTATTAATTTAATGAATGCTACGGAGAATTTTCATGATCGATATATCATTGGTGAAGGAGGGCATGGAATTGTTTATAAGGCCAAACTTGATATTGGAGTTTTTGCCATTAAGAAGGTTAAATTTGGACAAAGCAATAGGAGGAAAGTAAACATGATCAGAGAAATTCAAATGACTAGGAAGATTAGGCATCAAAATGTGGCAAGATGCGTAGGCTCCTGGATAGGGGAGGAATATGGTCTAACCATTAGCAGTTACATGGAAAATGGAAGCCTTCATGATGTTTTACACGAAAACGATCCACTACCATACTTAGCATGGAATGTCCGCTATAAAATTGCTATTGGAATTGCAAAAGGACTGGCATATCTCCATCACGACTGTGATCCTCCCATATTGCATAGAGATATCAAACCAAAGAATATACTCCTTGATTCTGAGATGCAACCTCGTATTACTGATTTTGGTATTTCCATTGCTTTGAATCAATCCTCTACTACAATGCATATTCGGTCAACATATCATCTAGGTACACTTGGGTTTATGGCACCGGAGATTGCATGTGTGATAGAGCCAAGCTGTGAACTTGATATATATAGTTACGGTGTAGTTTTGCTAGAGCTGATAACTAGAAAGAAAGTATTAGATTCCTCATTCATGGCGGAGGAAACCACATTAGTAGGGTGGTTTAAATCTGTATGGAGGACAACCAGAGAACTTGAAGAGATTGTTGATTCAAGCATTGCAAGGGAGCTTCCAGTTTTAAATGTAATGGTGCAAGTTATCAAAGTGATTTTGGTGGCTTTGATATGTACTGAGACAGATCCAGGAAAGAGACTGAAAATGAGAGATGTTGTGGAATTCTTTGAAACATCCACAGATCCAGGAATTTTTGTTCGATATTATGGAGAATTTCATTTGGGAAATTCTCTTGCTACTGCGGCAGCCTCTATGTTTTTTCAGGAAGCCACGATCCCTGCCAGTAGAGATTATTCCTCAATTCTTCATGAGGTGATGGAGGCTACTGCAAACCCAAACAATCTGAATATTATCGGCAGAGGAACTCATGGAGTTGTTTATAAAGTTCCACTTGGTCAAGACCTAGTTTATGTTGTAAAGAAGCTTGAATTTGCAGGGAACAAAAGAAAGATCCAAACCATAGTTAGAGAGATCAAAATCCTGATAAAGATTAGGCACAGAAATCTTGTTGGATTACTAGACTTTTTGTTCACAAAGAACTATGGTATAATTGTATACAGTTACATGCCAAATGGAAACCTTCATGATGTTTTGCATGAAAAGAATCCACCACTATCCCTAGTTTGGACTGTCCGGCATAGGATAGCAGCTGGAATTGCTTATGGATTGGCTTATCTCCATTATGACTGTTATCCCGCCATTCTGCACCGTGCCATCAAACCAAAAAATATACTTTTAGATTATGATATGGAGCCTCGTATTGCTGATTTCAGTATTGCCAAGCTTTTGGATCAACCTTCTTCGAGACCATCTTCATCTGTTCCAGAGAATACATATTCAACAGCAAATACTAGGGAATCTGATGTCCACAGTTTTGGGGTAGTTTTGCTTGAGTTGATAACTAGAAAGAAGGCAGTGGATCCATCATTTATGGAGGGAATTGAGATAGTGGGTTGGGTCAAAACTCTATGGCAGGAAACAGGAGGAATTTATAAAATTATTGACTCAAGCCTAATTGAGGAGGTTTTGAATCCAAATGTTCTTAAACAAGTTGTCAATGTGCTTTTGGTGGCACTAAGGTGCACTGAGGAGGATCCAGACATGAGACCAACAATGAGAGATGTTATCAACCAATTGGAAGATGCTTATATTTGA 3777 0.3876 MLQLLLIICLSAPLYAASALNSDGLTLLSLLSHWTSVPPSLNSSWNSSDSIPCLWTGIQCDKYSKVISLNLTAYSIFGNLGPEIGQLTHLRNLVLVANGFSGTVPLELGNCSLLEYMDLSDNCFSGNIPPEIGNCKSLMKLHLYSNQLGGTIPNELGGLSKLEDLELYSNHLTGELPLTIWKIQNLKHVLLHNNSLSGKLPSEMTELKHLKNISLFDNQFFGSIPQNLGINSSLVKLELMNNKFTGDIPPNLCFGKQLHTLSLGLNQLQGGIPQDLGRCATLGRLVLNENNLSGSLPEFEGNHNLIYMDMIKNNISGVIPSSLGNCTSLTALILSMNNITGNIPLELGNLVNLHALNLSHNNLEGPLARQLLYCTKMLTFDVGFNFLNGSFPSSMRSWTGLTTLVLRENRFSGDIPSFLSEYEQLLELQLGGNMFVGKIPASIGSLQNLLYGLNLSSNKLTGEIPLEIGKLQKLQSLDISLNNLTGSLCVLGELSSLTEVNISYNSFVGPLPEWKTQLLNLSSSLVMGNPGLCVLCSTSNGPSCINFSLLKPGDSESTNHNGSRHSILFIAVGFVGFVIFLSGILLIYYHHSRQRSNEEVLTYPNEQIYIHKMGQRSELKANFADYKLQEASYSNDEVDFRIINLMNATENFHDRYIIGEGGHGIVYKAKLDIGVFAIKKVKFGQSNRRKVNMIREIQMTRKIRHQNVARCVGSWIGEEYGLTISSYMENGSLHDVLHENDPLPYLAWNVRYKIAIGIAKGLAYLHHDCDPPILHRDIKPKNILLDSEMQPRITDFGISIALNQSSTTMHIRSTYHLGTLGFMAPEIACVIEPSCELDIYSYGVVLLELITRKKVLDSSFMAEETTLVGWFKSVWRTTRELEEIVDSSIARELPVLNVMVQVIKVILVALICTETDPGKRLKMRDVVEFFETSTDPGIFVRYYGEFHLGNSLATAAASMFFQEATIPASRDYSSILHEVMEATANPNNLNIIGRGTHGVVYKVPLGQDLVYVVKKLEFAGNKRKIQTIVREIKILIKIRHRNLVGLLDFLFTKNYGIIVYSYMPNGNLHDVLHEKNPPLSLVWTVRHRIAAGIAYGLAYLHYDCYPAILHRAIKPKNILLDYDMEPRIADFSIAKLLDQPSSRPSSSVPENTYSTANTRESDVHSFGVVLLELITRKKAVDPSFMEGIEIVGWVKTLWQETGGIYKIIDSSLIEEVLNPNVLKQVVNVLLVALRCTEEDPDMRPTMRDVINQLEDAYI 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0543 1258 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1063 1257 - -
Lele40g0543 1258 FunFam Leucine-rich repeat receptor-like kinase 25 128 - -
Lele40g0543 1258 Gene3D Transferase(Phosphotransferase) domain 1 728 936 - -
Lele40g0543 1258 Gene3D Transferase(Phosphotransferase) domain 1 1063 1257 - -
Lele40g0543 1258 SUPERFAMILY L domain-like 23 298 - -
Lele40g0543 1258 ProSitePatterns Serine/Threonine protein kinases active-site signature. 773 785 IPR008271 GO:0004672|GO:0006468
Lele40g0543 1258 FunFam MDIS1-interacting receptor like kinase 2 isoform A 129 228 - -
Lele40g0543 1258 Gene3D Phosphorylase Kinase; domain 1 950 1062 - -
Lele40g0543 1258 Pfam Protein kinase domain 653 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0543 1258 Pfam Protein kinase domain 989 1251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0543 1258 SUPERFAMILY L domain-like 298 534 - -
Lele40g0543 1258 SUPERFAMILY Protein kinase-like (PK-like) 973 1253 IPR011009 -
Lele40g0543 1258 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 728 936 - -
Lele40g0543 1258 ProSitePatterns Protein kinases ATP-binding region signature. 658 680 IPR017441 GO:0005524
Lele40g0543 1258 Gene3D Ribonuclease Inhibitor 301 546 IPR032675 -
Lele40g0543 1258 Gene3D Phosphorylase Kinase; domain 1 631 724 - -
Lele40g0543 1258 ProSitePatterns Protein kinases ATP-binding region signature. 992 1015 IPR017441 GO:0005524
Lele40g0543 1258 Gene3D Ribonuclease Inhibitor 23 182 IPR032675 -
Lele40g0543 1258 Gene3D Ribonuclease Inhibitor 183 300 IPR032675 -
Lele40g0543 1258 SMART serkin_6 652 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0543 1258 SMART serkin_6 986 1258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0543 1258 SUPERFAMILY Protein kinase-like (PK-like) 639 930 IPR011009 -
Lele40g0543 1258 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 233 930 - -
Lele40g0543 1258 Pfam Leucine rich repeat N-terminal domain 21 61 IPR013210 -
Lele40g0543 1258 ProSiteProfiles Protein kinase domain profile. 652 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0543 1258 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 256 542 - -
Lele40g0543 1258 ProSiteProfiles Protein kinase domain profile. 986 1258 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0543 Lele-ChrLele40 4591415 4596663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0543 66 931 Receptor kinase-like Gene Family AT1G73080 44.165 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele40g0543 Pkinase 1.8e-41 CL0016