Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0537 ATGGAAAAATTGGAAACACGTGGAAATACTCCATTTCGCAGAGGTTTCGCCTGTGTTATTTACTCGCCGTGGCCGGGAACAGACGCAAGCAGGCGTCTCACGATCATTGGTTTGGTCACTCACATTTTAGAGGAACTTGAGAAATATATTTTCCAATTTCAAAGAGAAAGTGTTTTCCATTTATTAACCTTGGCTGGCTTGCAGATGGGTTCTGTAGAGGGGGAGAAGATAGTCCTCGATTTTGATGAAGAGTTCGGTTCTGGCTCTGTAGAACTTGTGAGAGAAGATACTTATTTTGATGTTGAGACAACACAAGAGGCAAACCCAACCATGCTCAGAAAAATATTGGCAAGATCAATCAGGAGCTTACAATTCGTTATATTTAAGGAAAAAATCTGCCGGATGCTACCTTTTGGTCCCTTGGCAGTCTTGCTGCATTATCTTACTGGAATAGAAGTACGCAATGCAACTGCAGTTCTTGAACATTTTTATTGGTCTTTGCATGCTTTGATTAGTATAATAGGAAAGAAATCTAGAATAGCAGTGAGGATTTTTTCTCTTGGGGACTTTAAACTCATGCTGCTTCATATGTTATTACAGAATATTGTGTTTTATTCGGCCTTATTGGGCATGATTCCTTTGGGCAATCGACTAAATTATGCTTCCAAGCAGCTTGCTCATTACACTCAACCAATAGTGAGGGTTTATCTGTTAGCCTTGTTTGGAAATGCAACTGATATGATTATATCGATTCATGCTTTGAGAAATGGAATGTTGAGCACTGTTTATGAGTCTTTACTGGGCTCTGTCTTGTCAAACATGCTTCTTATTCCTGGTTGTGCTTTCTTTACTGGTGGGATCGTCCACTCTATCAGGATTCAGTTCTTCAGTAAGGCATCTGCTAGTGCAAAATCTGGGTTGCTCTTGATGGCTGTGATGGGAATACTGTTTCCTGCTGTGCTGCACTTTACTCACACAGAAGCCCATTATGGAAGATCAGAGTTATCGCTATCCAGATTTAGTAGCTGTATAATGCTAGTGGCATATGCCAGTTACCTCCGTTTTCAACTTCAAATTAAGCAGAGTCTTGATGATACTCTTACTCAGGAGGAAGGGGATGAAGAGGAAGTATGCGAATTAAGCAAATGGGAAGCAATAGGCTGGTTGGCTCTATTAATAGCTTGGACATCTCTATTGACAAAACACCTTGTCGATGTGATCCGGGTCACATCAGAGTCAACAAACATACCACAGACTGTTATAACAGTTATTTTGCTTCCTCTTGTAGAACATGCAGATGCCATCATGTTTGCCATTAAGGACAAGCTGGACTTTACACTTGAAGATGCTGTTGGATCATCTATACGACTAATTATGTTTGTGATGCCCATCAGCGTACTTGTTGGGTGGTCCATGGGACGAACCATGCTCTTGAATTTTTCACTTTTCGAGACAACTGTGCTACTTATATCTGTCCTAATTGTAGCATATGCTCTGCAGGTAGATCCTTCAAGTGATGAGTTTGACTAA 1530 0.4072 MEKLETRGNTPFRRGFACVIYSPWPGTDASRRLTIIGLVTHILEELEKYIFQFQRESVFHLLTLAGLQMGSVEGEKIVLDFDEEFGSGSVELVREDTYFDVETTQEANPTMLRKILARSIRSLQFVIFKEKICRMLPFGPLAVLLHYLTGIEVRNATAVLEHFYWSLHALISIIGKKSRIAVRIFSLGDFKLMLLHMLLQNIVFYSALLGMIPLGNRLNYASKQLAHYTQPIVRVYLLALFGNATDMIISIHALRNGMLSTVYESLLGSVLSNMLLIPGCAFFTGGIVHSIRIQFFSKASASAKSGLLLMAVMGILFPAVLHFTHTEAHYGRSELSLSRFSSCIMLVAYASYLRFQLQIKQSLDDTLTQEEGDEEEVCELSKWEAIGWLALLIAWTSLLTKHLVDVIRVTSESTNIPQTVITVILLPLVEHADAIMFAIKDKLDFTLEDAVGSSIRLIMFVMPISVLVGWSMGRTMLLNFSLFETTVLLISVLIVAYALQVDPSSDEFD 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0537 509 FunFam Vacuolar cation/proton exchanger 231 371 - -
Lele40g0537 509 Gene3D - 231 370 IPR044880 -
Lele40g0537 509 Gene3D - 373 506 IPR044880 -
Lele40g0537 509 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 112 500 IPR004713 GO:0006812|GO:0008324|GO:0016020
Lele40g0537 509 Pfam Sodium/calcium exchanger protein 202 357 IPR004837 GO:0016020|GO:0055085
Lele40g0537 509 Pfam Sodium/calcium exchanger protein 386 498 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0537 Lele-ChrLele40 4521896 4526216 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0537 120 508 Antiporters AT3G13320 49.373 1.76e-114 343