Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0534 ATGAAGACAAGCTGGATCCATCTTGAAGATCTTAGTACTGTTCAGTTCAAATCCAGGTGTTTTTCTCAGGCAATTTTCTTTATCCTCTATCTTTTGCCATTGATCTCGTTATTTGATGAGCTTCGTGATTGCTGCCACTTTTTTTACTTGGTTGTGAGTGGTAACTTGTCAACTGATCTGCTGTACGTCAATTACGATGCGGTACTACTGATGGGTTCTGCAGAGGATAAAATAGACCTTGACTCAGATGAGGAGATTGCTTTTAGACCGTCACCATCTGCAAGAAAAGTCCAGACATTTGATTTTGAGACAGGACATGTACTTTCTCCTGAAAATTTGGCAAGCTCATCCTTCTTTAAGCGGACACAGATCCGACCTTTCAGGAGCATATATATTGTCTTAATTAAAGCGAAGATCAACATGTTGCTACCTTTTGGTCCCTTGGCTATATTGCTACATTATCTAACACAAAAGCATGGATGGGTGTTCTTTTTCAGCTTATTGGGTATTACTCCTTTGGCAGAACGTTTGGGATATGCTACCGAGCAGCTTGCATTTTATACTGGACCAACAGTTGGAGGTCTGCTGAATGCCACATTTGGCAATGCCACTGAAATGATTATATCAATTTATGCTTTGAAAAATGGGATGATTAGAGTTGTTCAGCAGTCTCTATTGGGGTCAATTCTATCAAATATGCTTCTGGTTCTTGGATGTGCCTTCTTTACTGGAGGGATTGTCCATGGCAATAAGATTCAGCGTTTCAACAAGGCATCTGCTGTTGTAAATTCAGGGTTGCTCTTGATGGCTGTGATGGGAATACTGTTTCCTGCTGTGCTTCACTTTACTCACTCTGAGGTTCATTTTGGAAAATCAGAGTTATCATTATCCAGATTTAGTAGCTGTATAATGCTTGTGGCATATGCAAGCTACCTTTTCTTTCAATTAAGAAGTCAGCATAATCTTTATAGCCCTATTGAACCGGAGGATGGTAATAGTGAAAATGATGATGAGGAAGAAGTTGAATTAACTCAGTGGGAAGCAATAAGCTGGCTTGCTATTTTGACAATATGGGTATCTGTATTGTCCGGATACCTTGTGGATGCAATACAGGGGGCATCTGACTCATTGCATATGCCTGTGGCTTTTATTAGTGTCATATTGCTTCCAATTGTAGGCAATGCTGCTGAACATGCAAGTGCTATCATGTTTGCCATGAAGGATAAGCTTGACATCACACTTGGAGTTGCTATTGGATCTTCTACACAGATATCTATGTTTGTGATCCCTTTCTGTGTTGTTGTTGGGTGGTGCATGGGAAAAGAAATGGACTTGAACTTTCAACTCTTCGAGACCGCCACACTTTTTATCACAGTGCTTGTAGTTGCATTTATGTTGCAGGAAGGAACCTCAAATTATTTTAAAGGCTTGATGCTTATTCTTTGCTACCTCATTGTTGCAGCCAGTTTTTTTGTACATGTAGACCCTACAGAAGGCGAGTTACTAAAAGTTTACTCTCATTGA 1524 0.4003 MKTSWIHLEDLSTVQFKSRCFSQAIFFILYLLPLISLFDELRDCCHFFYLVVSGNLSTDLLYVNYDAVLLMGSAEDKIDLDSDEEIAFRPSPSARKVQTFDFETGHVLSPENLASSSFFKRTQIRPFRSIYIVLIKAKINMLLPFGPLAILLHYLTQKHGWVFFFSLLGITPLAERLGYATEQLAFYTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHGNKIQRFNKASAVVNSGLLLMAVMGILFPAVLHFTHSEVHFGKSELSLSRFSSCIMLVAYASYLFFQLRSQHNLYSPIEPEDGNSENDDEEEVELTQWEAISWLAILTIWVSVLSGYLVDAIQGASDSLHMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPTEGELLKVYSH 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0534 507 Gene3D - 190 330 IPR044880 -
Lele40g0534 507 Gene3D - 337 492 IPR044880 -
Lele40g0534 507 FunFam Vacuolar cation/proton exchanger 336 492 - -
Lele40g0534 507 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 112 496 IPR004713 GO:0006812|GO:0008324|GO:0016020
Lele40g0534 507 Pfam Sodium/calcium exchanger protein 161 316 IPR004837 GO:0016020|GO:0055085
Lele40g0534 507 Pfam Sodium/calcium exchanger protein 351 488 IPR004837 GO:0016020|GO:0055085
Lele40g0534 507 TIGRFAM caca2: calcium/proton exchanger 133 491 - -
Lele40g0534 507 TIGRFAM cax: calcium/proton exchanger 142 491 IPR004798 GO:0006816|GO:0015369
Lele40g0534 507 FunFam Vacuolar cation/proton exchanger 190 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0534 Lele-ChrLele40 4505677 4512573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0534 115 501 Antiporters AT1G55730 73.791 0.0 584