Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0532 ATGGAGTCATCAATAATGTCCACTGTGTCAGTTCTCATCTTCTTCGTTTCAATTTCGTTATCTCTGTATTTCCATGGCGGCAAGGCATCGGTGGTTATTGTGTCCCAGGATGGAGATGGAGATTATGAAAGTGTGAGTGAAGCCATAGCCAAAGCTCCCGAGTTCAGTGAAAACCCCTACACCATTCAAGTTCGAAGTGGCACTTATAAAGAGTACATCGTGGTTCCGAGGGAGAAAACTAACATTAAGCTCGTCGGCGACGGCCCTCTTCAGACCAGAATAGATGGCTCCCACCATGGCACCACCCTCGATGTGTATGGAAATGGGTTCATGGCGGAGAACATAGGGCTGGTGAACTCAGCCGGGTTAAAAGCTAGCGCCGCCGTGACAGTTCGCAATGAAGCCAACAACAGCATCTTCTTCCAATGCTCCATCGAAGGCTTCCAAGACACACTCTGGGCCGTTGCCGGCCGCCAGTTCTACAAGAACTGCGACATCTATGGCACCGTCGACTTCATCTATGGCGACGCCGCTGCCCTCTTTCAGGACTGTAACCTCTACGCTCGCTACAGGCCTTACGTCACATTCACCGCCCAGTCACGTGACAGCCCCGACGAGCAAACCGCCTTCGCCTTCCAACACTGTTACTTCACAATGGCCCCTGAGGACGCCGGCATGAAGTCGAAGGTCCGTGCGACATTGGGAAGGCCGTGGCGGCCGTATTCAACGGTGGCGGTGATTGACTCGTTCCTTGACTCTATGATTGACCCCACGGGATGGGAAGAGATGCAAGGTCAGCCTACCGATAAGGTGACATATGTGGAATTTAATAACTATGGGCCTGGATCCAACACTTCTGGAAGAGTCAACTGGCCTGGTGTTAGAGTCCTTGATGACCCAAATGAGGCCCAACGTTTTACAGCTTCCGTTTTTTTAGACGCTGATTCTTGGATCCCCGACAAGGGGGTTCCTTATAATGGATAG 984 0.5163 MESSIMSTVSVLIFFVSISLSLYFHGGKASVVIVSQDGDGDYESVSEAIAKAPEFSENPYTIQVRSGTYKEYIVVPREKTNIKLVGDGPLQTRIDGSHHGTTLDVYGNGFMAENIGLVNSAGLKASAAVTVRNEANNSIFFQCSIEGFQDTLWAVAGRQFYKNCDIYGTVDFIYGDAAALFQDCNLYARYRPYVTFTAQSRDSPDEQTAFAFQHCYFTMAPEDAGMKSKVRATLGRPWRPYSTVAVIDSFLDSMIDPTGWEEMQGQPTDKVTYVEFNNYGPGSNTSGRVNWPGVRVLDDPNEAQRFTASVFLDADSWIPDKGVPYNG 327
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0532 327 Gene3D - 28 327 IPR012334 -
Lele40g0532 327 SUPERFAMILY Pectin lyase-like 29 325 IPR011050 -
Lele40g0532 327 FunFam Pectinesterase 4 28 327 - -
Lele40g0532 327 PANTHER PECTINESTERASE 32 319 - -
Lele40g0532 327 Pfam Pectinesterase 32 314 IPR000070 GO:0030599|GO:0042545
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele40g0532 Lele-ChrLele40 4476863 4480372 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0532 34 325 Carbohydrate Esterase AT4G02300 39.542 3.12e-78 246