Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0513 ATGCTTGCACATAATCTATCTAAAGACCACAAGCCTGACCTTGAAGTTGAGAGAGATAGGATTCTAAAAGCTGGTGGTTTCATACAAGTTGGGCGAGTTAATGGAAGTCTAAACTTGGCCAGAGCAATTGGAGACATGGAATTTAAGCAAAACAAGTTTTTGCCTGCTGAAAAGCAGATTGTGACCGCTGATCCGGATATAAATTCTGTTGAGCTTTGCGATGATGATGAGTTTCTTGTAATAGCATGTGATGGAATATGGGATTGCATGTCCAGCCAACAGCTTGTGGATTTTATACATTTACAGCTGAAGACGGAGAATAAACTCTCTGCAGTTTGCGAGAAAGTATTTGATCGGTGCTTATCACCTAAGTCTGGCGGCGAGGGATGTGACAACATGACCATGATCTTGGTTCAGTTCAAAAGGCCTTCGAGTCCAGATGATTCGATTACAGACAAGCCTCCGTCTGCTCAGCCATCCAAGGCTGATTATGAGAGTTCAAATCAACCATCCAACAGCGAAAGAAGTTCAGACCAACCAATCTAG 546 0.4286 MLAHNLSKDHKPDLEVERDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTADPDINSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHLQLKTENKLSAVCEKVFDRCLSPKSGGEGCDNMTMILVQFKRPSSPDDSITDKPPSAQPSKADYESSNQPSNSERSSDQPI 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0513 181 SMART PP2C_4 2 138 IPR001932 -
Lele40g0513 181 PANTHER PROTEIN PHOSPHATASE 2C 4 139 IPR015655 GO:0004722|GO:0006470
Lele40g0513 181 MobiDBLite consensus disorder prediction 142 181 - -
Lele40g0513 181 SUPERFAMILY PP2C-like 3 142 IPR036457 -
Lele40g0513 181 MobiDBLite consensus disorder prediction 149 181 - -
Lele40g0513 181 ProSiteProfiles PPM-type phosphatase domain profile. 1 140 IPR001932 -
Lele40g0513 181 CDD PP2Cc 3 140 IPR001932 -
Lele40g0513 181 Gene3D - 2 171 IPR036457 -
Lele40g0513 181 Pfam Protein phosphatase 2C 4 125 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0513 Lele-ChrLele40 4330184 4335101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0513 3 149 PP2C-type Phosphatase Gene Family AT2G25070 77.632 3.13e-85 253