Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0502 ATGGCGGAGGAACAGAGACAGTCGAGGAGCGTCATCTTCAACAAGTATGAGATGGGGAGGCTCCTCGGCCAAGGGAATTTCGCCAAGGTCTATTATGGAAGAAACCTCGTGACCCACGAGAGCGTTGCGATTAAGGTGATTAAGAAGGATAAGCTTGAGAAAGGGAAGCTGAAGCTGATGAAGCAGATCAAGCGGGAAGTCTCGATAATGCGACTGGTCCGTCACCCACACATCGTGGAGCTGAAAGAGGTCATGGCTACAAAGGGAAAGATCTTTCTGGTTATGGATTATATTAAAGGCGGTGAACTGTTCGCTAAAGTCACCAAAGGAAAATTGAAGGAAGATTTAGCGAGGAAATATTTCCAGCAATTGATTTCCGCCGTCGATTTCTGTCACAGCCGCGGCGTCACTCACCGGGATCTCAAGCCTGAGAATCTGTTCCTCGACGAAAACGAGGATCTGAAAGTCTCCGACTTTGGGCTATCAGCGTTGCCAGAGCAGCGCCGGTCCGACGGGATGCTCGTGACGCCGTGTGGGACGCCGGCGTACGTGGCGCCGGAGGTGTTGAAGAAGAAAGGGTACGATGGGTCCAAAGCAGATATCTGGTCCTGTGGGGTAATTCTCTATGCTCTGCTTTCTGGGTATCTTCCATTTCAAGGTGAGAATGTGATGAGAATTTACAAGAAAGCATTCAAAGCTCAATACGTATTACCAGACTGGATTTCACCAGAAGCAAAGAATTTGATCTCTAAATTACTAGTGGTCGACCCAGAAAAGAGATATTCGATCGAAGACATCATGAAGGATCCGTGGTTTCAATATGGGTTCATGAGACCAATCGCATTTTCAATGAAAGAACCAAGATTTGAAGATTTCGCCGACGATGATAACATCGAAGAAGTGGAAGAAAGAGTGGTGGGAGGACAGGGAAGTAGTGAAGATGATCAACAACAAGCACAATCACAATCACAATCACAATCACGGCCATTTTACAATGCGTTTGAGATAATTTCGTCGTTGTCACATGGGTTTGATCTGAGGAGCTTGTTTGAGACGAGGAAGAGGTCGCCGTCGATGTTCACGACGAAGTTCTCGGCGGCGGCGGTGGTGGGGAAGATGGAGGCGGTGGCGAGGAAGTTGAATCTGAGGATAACGGGGAAGAAGGAGTACATGGTGAGGATGCAGGGGACGAAAGAGGGAAGGAAAGGGAAGCTAGGGATGACGGTGGAGGTGTTCGAGGTGGCGCCGGAGGTGGCGGTGGTGGAGTTCTCAAAGTCCTCCGGCGACACGTTGGAGTATATGAAGCTGTGTGAGGAACAAGTGAGACCAGCACTGAAAGACATTGTGTGGAATTGGCAAGGTGATACCAATCCTCATCCATAA 1383 0.4895 MAEEQRQSRSVIFNKYEMGRLLGQGNFAKVYYGRNLVTHESVAIKVIKKDKLEKGKLKLMKQIKREVSIMRLVRHPHIVELKEVMATKGKIFLVMDYIKGGELFAKVTKGKLKEDLARKYFQQLISAVDFCHSRGVTHRDLKPENLFLDENEDLKVSDFGLSALPEQRRSDGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLSGYLPFQGENVMRIYKKAFKAQYVLPDWISPEAKNLISKLLVVDPEKRYSIEDIMKDPWFQYGFMRPIAFSMKEPRFEDFADDDNIEEVEERVVGGQGSSEDDQQQAQSQSQSQSRPFYNAFEIISSLSHGFDLRSLFETRKRSPSMFTTKFSAAAVVGKMEAVARKLNLRITGKKEYMVRMQGTKEGRKGKLGMTVEVFEVAPEVAVVEFSKSSGDTLEYMKLCEEQVRPALKDIVWNWQGDTNPHP 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0502 460 CDD CIPK_C 332 446 - -
Lele40g0502 460 Pfam NAF domain 330 385 IPR004041 GO:0007165
Lele40g0502 460 Gene3D Kinase associated domain 1, KA1 326 451 - -
Lele40g0502 460 FunFam Non-specific serine/threonine protein kinase 326 450 - -
Lele40g0502 460 ProSiteProfiles NAF domain profile. 326 351 IPR018451 GO:0007165
Lele40g0502 460 MobiDBLite consensus disorder prediction 303 327 - -
Lele40g0502 460 FunFam Non-specific serine/threonine protein kinase 9 320 - -
Lele40g0502 460 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 446 - -
Lele40g0502 460 SUPERFAMILY Protein kinase-like (PK-like) 12 330 IPR011009 -
Lele40g0502 460 Pfam Protein kinase domain 16 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0502 460 FunFam Aurora kinase A 8 101 - -
Lele40g0502 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Lele40g0502 460 SMART serkin_6 16 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0502 460 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Lele40g0502 460 Gene3D Phosphorylase Kinase; domain 1 1 97 - -
Lele40g0502 460 ProSiteProfiles Protein kinase domain profile. 16 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0502 460 Gene3D Transferase(Phosphotransferase) domain 1 98 276 - -
Lele40g0502 460 MobiDBLite consensus disorder prediction 310 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0502 Lele-ChrLele40 4240221 4241603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0502 7 457 CBL-interacting serine-threonine protein kinases AT5G10930 60.220 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele40g0502 Pkinase 1.6e-75 CL0016