Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0499 ATGGATTGTTCATCTTGGGTCAACACGTCCTTGGATCTCAACATTAGACCTCATCATCATAGGCTTCATGAAGAAGTTCCAAAAAAGGAGTTGGAAAGCAATTTTTTCTCATCTGGGAAGAAATCTTCTGTAAAAGAAGAGTCATTTCAGACAAGTAGTGGTGCGTTGGAGGATGAACTGAAGAGGGTGAGTGCAGAGAACAAGAAGTTAACAGAAATGCTCACTGAGATGTGTGAGAATTACAATTCTCTGAGAAGACACTTGGCTGAATGCATGAGAAACAATCCTCAAAAGGATCAAAACAACACCATCCCATCAAAGAAAAGGAAGTCTGATAACATCAGCAACAACAACACTACTAATAGTAATCCCATGGCCATTAATGGTACCACAGAAAGCTGCTCAACTGATGAAGAATCATGCAAGAAACCTAAGGAAGGCACCAACAAAGCCAAAGTTTCCAAATCTTATGTCAGGACCGATTCATCTGACACTAGCCTGATTGTGAAGGATGGATATCAATGGAGGAAGTATGGGCAAAAGGTTACCAGAGATAACCCTTCTCCAAGAGCCTATTTCAAATGCTCTTTTGCTCCAAGTTGTCCTGTCAAAAAGAAGGTGCAAAGAAGTGTGGAAGATCAATCTATTTTGGTTGCAACATATCTAGGGGAGCACAATCATCCTCATCCTTCTCAGATGGAGACGACAACAACAGGATCTAACCGTTTTGCGAACCAAGCTTCAGTACCATGTTCATCGGCATCTCTGAACTCTTCCTTTGCACCAGCAACAATTACATTTGACTTGACAAAATCCAAGTCCAGTACCAACAACATGATCAATGCCACCCCCACCACCACCAACAAGAACCCTAAACCGAAACTCGATTCACCGGAAGTCCCTCAGGTTTTGGTGGAACAGATGGCGTCTTCCTTGACTAAAGATCCCAATTTCAGAGCAGCTCTTGTTGCCGCCATTTCTGGAAGAATATCCCACGCGAATTAA 1005 0.4249 MDCSSWVNTSLDLNIRPHHHRLHEEVPKKELESNFFSSGKKSSVKEESFQTSSGALEDELKRVSAENKKLTEMLTEMCENYNSLRRHLAECMRNNPQKDQNNTIPSKKRKSDNISNNNTTNSNPMAINGTTESCSTDEESCKKPKEGTNKAKVSKSYVRTDSSDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSILVATYLGEHNHPHPSQMETTTTGSNRFANQASVPCSSASLNSSFAPATITFDLTKSKSSTNNMINATPTTTNKNPKPKLDSPEVPQVLVEQMASSLTKDPNFRAALVAAISGRISHAN 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0499 334 MobiDBLite consensus disorder prediction 95 135 - -
Lele40g0499 334 MobiDBLite consensus disorder prediction 31 54 - -
Lele40g0499 334 MobiDBLite consensus disorder prediction 275 297 - -
Lele40g0499 334 MobiDBLite consensus disorder prediction 136 152 - -
Lele40g0499 334 Pfam WRKY DNA -binding domain 170 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele40g0499 334 Coils Coil 53 80 - -
Lele40g0499 334 Gene3D WRKY domain 148 231 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele40g0499 334 ProSiteProfiles WRKY domain profile. 164 230 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele40g0499 334 MobiDBLite consensus disorder prediction 36 54 - -
Lele40g0499 334 FunFam WRKY transcription factor 40 154 231 - -
Lele40g0499 334 SMART WRKY_cls 169 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele40g0499 334 SUPERFAMILY WRKY DNA-binding domain 165 230 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele40g0499 334 MobiDBLite consensus disorder prediction 275 293 - -
Lele40g0499 334 MobiDBLite consensus disorder prediction 95 154 - -
Lele40g0499 334 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 32 331 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0499 Lele-ChrLele40 4193561 4195059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0499 4 334 WRKY Transcription Factor Family AT1G80840 48.665 1.60e-93 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele40g0499 WRKY 1.2e-22 CL0274