Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0494 ATGGTATGGGATGGAAAGGGATTCTCAGAGTGTTTCGAAGATATATATCCTCATCTTCTTAATTCGATATCAGTTTCTGAATGGATTAAAAAGTTACGTTTTTTATATATAAATTTCTTTTCCTTAATAACACCCACGGTTTTAGGTTTTGGACTGAATGCAGTGACTATTGTTATAATTGTTGTGATTGGATGCACTTACAAGAGCAGCCGAGGAATTTCAAGATCAGACACGCAGATGGCCTTTTTGAAGAAGCTTTTCCTGCATCTTGTACCAGCTGTTGGAGCATGTGCTTCGTTGTTGGACATAATTTTTCTATGGAAGAGAGAAATTAACAGGCACTTTGTTGGATATCATAAGTGGTTCTATAGCTGTTCTGAGTTGATGGTGTGGACAAATATCATTCTCTTCTCAAGGTGTATCAGCAGTCATTACATGCTCTGCAACAATGTCTTGTGTTACTGGTGGATTCTGAAACCCCTTTTCTGGATCTTCCATTTGTTTACAAAGTTCCCATTGTTGGAGACTCCAATATGCCTTGTGGAATTCTTTATTCTTCTCCTGAATATCACATTTGTCATATCCATCAATGTCATAAGAATAAACATATTGTCTTCCAAAAACAGGTACATGATGGCCACTCTTTTTTACATAGTCACTTTCTTTCTGAGTTTTTGTTCATTTGAAGAGCCACTTCTTTCCAATGATATGGACCTTGAGGAAGGTTTCCATTGTGACCTCGAAAAATCTAGGAACTTTTGTGATTTGATGACTTTCAAATTCATAAATCCTGTAATAAACCATGGTGTGGTTAAACAACTGGACTTTGAAGATCTGCTGCAACTACCTGCAGATTTGGATCCTTCGTCCTGTCATGATGTAATTTCCACCTGCTGGCAAGAACAACTGAGCAATAATGGTTCAAACCCATCTTTACTTAGAGCAGTATGCTGTGCATATGGATGGCCATATCTCCGCCTGGGTTTATTGAAGGTGGTTAATGATTGTATTGGTTTTGCGGGACCATTGCTTCTCAATAAGCTGATCAGATTTCTTCAACAAGGTTCAGAGGGTTTAGATGGATATTTACTTGCTATATCCTTGGGCCTCACATCTGTAACTAAATCCTTCTTAGATACACAATATACTTTTCATCTTAGCAAGCTGAAGTTAAAGCTACGGTCTAGTATCATGACTCTAATATATCAGAAGTGTCTATGTGTGAACTTAGCAGAGCGTTCAAAATTCTCTAATGGAGAAATTCAGACATTTATGTCTGTGGATGCTGACCGAACTGTGAACATGTGTAATAGTTTCCATGATGTGTGGAGCTTGCCTTTACAAATTGGAGTGGCGCTATATCTTTTGTATACTCAAGTCAAATTTGCATTTGTATCTGGATTAGCAATTACCATTTTGTTGATACCAGTCAATAAATGGATATCAAAATTGATAGCAAATGCAACGGAGAAAATGATGAAGGAGAAGGATGAAAGGATACGGAGGACCGGGGAACTTTTGACTTATATTCGCACTTTGAAGATGCATGGATGGGAACTTCTTTTTTCTGGTTGGCTGATGGAGACAAGATCTTCTGAAGTGAAACACTTAGCTACTCGGAAGTACTTGGATGCATGGTGTGTATTCTTTTGGGCTACAACGCCAACTCTCTTTTCTCTTTTCACATTTGGACTCTATGCATTGATGGGGCACCAGCTTGATGCTGCAATGGTTTTTACTTGTCTGGCTTTGTTCAACACATTAATTTCACCACTGAATTCATTCCCTTGGGTGATTAATGGATTGATTGATGCCTTTGTATCCTCGAGACGATTGAGCAGGTTTCTTTCTTGTCCTGAAAATAAAGCTAAGGTGAAAGAGACCAATTCATGTTCCTTGCCATTCCATAGTGAACAGCCCGACTCTCTGCAAGGTTTAGCGGTCTTTGTCCAAGATGCATGTTGTACTTGGTCAAGCAGTGATGAAGAAGGATTAAATTTGGTGTTGAAGCATGTCAGTCTAAGCCTGTCAAGGGGTTCCTTTGTTGCAGTGATAGGAGAGGTTGGTTCAGGTAAATCATCGTTGCTATATTCGATTCTTGGAGAAACACGGGTGGCTCATGGATCAATTCACTCTGATGGAGCAGTGGCATATGTACCACAGGTCCCATGGATTTTATCTGGAACCATACGTGACAACATAATATTTGGGAAACCTTATGATCCCAATAGGTATGCAGAAACTGTTCAAGCATGTGCTCTAGATGTTGATATCTCATTAATGGTTGGAGGTGACATGGCTTACATTGGGGAAAAGGGCGTCAACTTATCTGGTGGACAGAGAACTCGTCTTGCTTTAGCCAGGACACTGTATCATGGCTCTGATGTGATTATGCTTGATGATGTCCTGAGTACTGTTGATGCACAAGTTGCTCGATGGATATTACACAATGCCATTCTAGGTCCTCTTGTGCAGGGAAAAACTCGATTGCTCTGTACCCATAATATACAGGCAATATCCTCTGCTGATATGGTTGTTATAATGGACAAAGGACACATAAAGTGGGTGGGAAGTCCTAATGACCACCAAGTCTCTTCATATATAACATTCTCCCCATTGAATGAACTTGATTCGGATGTACAGAATCAAGGAAAACCTTGCTGCACAAATTCTTCTTCTGAATTAAAAGAGCTCCCAGGTAGTGAAATTAAACATGTTGTGGAGGGAGCAGAGGAGATCATTGAAGCTGAGTCGAGAAAAGAGGGAAAAGTGGAACTTGGAGTGTATAAGAACTACGCTATGTTCACTGGCTGGTTCATTACAGTTGTAATATGCATGTCAGCTGTTCTAATGCAAGCTTCTCGTAATGGAAATGATTTATGGCTGTCCTTTTGGGTTGATACGGAAGAAACCAGTCAAACAAGATACTCTCTGTCCTTTTATCTGGCTATACTGGCTCTCTTTTGCATCATAAATTCTTTTCTCACATTGGTGAGGGCGTTCTCTTTTGCATTTGGTGGCTTACAAGCAGCAATTAAAGTGCACAACAAAATGCTTGGCAATCTTATCAATGCACCTGTGCAATTCTTTGATCTGACCCCAGGTGGAAGAATACTCAACAGGTTTTCCTCGGATCTTTATACGATTGATGACTCCCTTCCATTCATTATGAACATTCTCCTAGCTAATTTGGTTGGCCTCTTGGGCATTGCAGTAGTTTTGTCATATGTTCAGGTCTTTTTCTTAATCCTGCTATTGCCGTTTTGGTATATCTACAGTAGACTCCAGTTCTTCTACAGGTCAACATCAAGAGAACTACGACGACTTGACAGTGTTTCTCGTTCTCCAATTTATACATCTTTCACTGAATCGCTTGATGGATCATCAACTATTCGGGCATTTAAATCTGAGGACTTATTTTTTTCCAAGTTCACTGAACATGTAATAATGTATCAGAAGACTTCTTACACAGAGATAGCAGCCAGTTTATGGCTTTCCTTACGTCTTCAATTATTAGCTGCATTCATCATCTCATTTATTGCACTGATGGCTGTGGTTGGAGGTCATGGCAGTCTGCCAATGAACTTTGGCACCCCTGGGCTGGTAGGATTGGCACTCTCATATGCTGCTCCAATAGTGTCCTTGTTGGGAAGCTTTTTAACAAGTTTCACTGAAACAGAAAAGGAAATGGTTTCAGTTGAAAGAGTCCTTGAATATATGGACATTCCTCAAGAAGAAATTGCTGGAGGCCGATGCATGAACCCAGATTGGCCAAATCAAGGAGTAATTGAGTTCCAAAATGTTACCTTAAAATACAAGCCATCTTTGCCTCCTGCACTCTGCAATCTTAGTTTTACAATTGCTGGAGGGACCCAGATTGGAATTATTGGAAGAACAGGTGCTGGAAAGTCTAGTGTGTTGAATGCTCTTTTTCGCCTTACCCCGATATGTACAGGCTCTATTTTCGTTGATGGCATAAACATTAACAACATTCCTGTCAGAGAACTACGTTCTCGTTTGGCTGTTGTTCCTCAGAGTCCATTCCTCTTTGAAGGATCATTAAGGGATAATCTAGATCCCTTCCAAATGCATGACGACTTGAAAATTTGGAATGCTTTGGAGAAGTGCCATGTGAAAGAGGAAGTAGAAGCGGCTGGAGGGCTGCATATTCTTGTAAAGGAATCTGGGATGTCTTTTTCAGTTGGCCAAAGGCAGCTTCTTTGCCTTGCACGTGCTCTTCTCAAATCTTCAAAGGTTCTCTGTTTGGATGAATGTACAGCCAACGTGGACACTCAAACTGCTTCACTCCTTCAAAGTACTATATCTGATGAATTCAAGGGCATAACGGTCATTACAATAGCTCACCGGATCTCGACAGTTATGAATATGGACAACATTTTAATTCTTGACCATGGGAACCTGGCTGAACAAGGAAACCCACGGGTTCTTCTGAAACATGACTCCTTATTCTCCAGTTTTACTAAAGCTTCATCAATGTAA 4500 0.4024 MVWDGKGFSECFEDIYPHLLNSISVSEWIKKLRFLYINFFSLITPTVLGFGLNAVTIVIIVVIGCTYKSSRGISRSDTQMAFLKKLFLHLVPAVGACASLLDIIFLWKREINRHFVGYHKWFYSCSELMVWTNIILFSRCISSHYMLCNNVLCYWWILKPLFWIFHLFTKFPLLETPICLVEFFILLLNITFVISINVIRINILSSKNRYMMATLFYIVTFFLSFCSFEEPLLSNDMDLEEGFHCDLEKSRNFCDLMTFKFINPVINHGVVKQLDFEDLLQLPADLDPSSCHDVISTCWQEQLSNNGSNPSLLRAVCCAYGWPYLRLGLLKVVNDCIGFAGPLLLNKLIRFLQQGSEGLDGYLLAISLGLTSVTKSFLDTQYTFHLSKLKLKLRSSIMTLIYQKCLCVNLAERSKFSNGEIQTFMSVDADRTVNMCNSFHDVWSLPLQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWISKLIANATEKMMKEKDERIRRTGELLTYIRTLKMHGWELLFSGWLMETRSSEVKHLATRKYLDAWCVFFWATTPTLFSLFTFGLYALMGHQLDAAMVFTCLALFNTLISPLNSFPWVINGLIDAFVSSRRLSRFLSCPENKAKVKETNSCSLPFHSEQPDSLQGLAVFVQDACCTWSSSDEEGLNLVLKHVSLSLSRGSFVAVIGEVGSGKSSLLYSILGETRVAHGSIHSDGAVAYVPQVPWILSGTIRDNIIFGKPYDPNRYAETVQACALDVDISLMVGGDMAYIGEKGVNLSGGQRTRLALARTLYHGSDVIMLDDVLSTVDAQVARWILHNAILGPLVQGKTRLLCTHNIQAISSADMVVIMDKGHIKWVGSPNDHQVSSYITFSPLNELDSDVQNQGKPCCTNSSSELKELPGSEIKHVVEGAEEIIEAESRKEGKVELGVYKNYAMFTGWFITVVICMSAVLMQASRNGNDLWLSFWVDTEETSQTRYSLSFYLAILALFCIINSFLTLVRAFSFAFGGLQAAIKVHNKMLGNLINAPVQFFDLTPGGRILNRFSSDLYTIDDSLPFIMNILLANLVGLLGIAVVLSYVQVFFLILLLPFWYIYSRLQFFYRSTSRELRRLDSVSRSPIYTSFTESLDGSSTIRAFKSEDLFFSKFTEHVIMYQKTSYTEIAASLWLSLRLQLLAAFIISFIALMAVVGGHGSLPMNFGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVSVERVLEYMDIPQEEIAGGRCMNPDWPNQGVIEFQNVTLKYKPSLPPALCNLSFTIAGGTQIGIIGRTGAGKSSVLNALFRLTPICTGSIFVDGININNIPVRELRSRLAVVPQSPFLFEGSLRDNLDPFQMHDDLKIWNALEKCHVKEEVEAAGGLHILVKESGMSFSVGQRQLLCLARALLKSSKVLCLDECTANVDTQTASLLQSTISDEFKGITVITIAHRISTVMNMDNILILDHGNLAEQGNPRVLLKHDSLFSSFTKASSM 1499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0494 1499 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1263 1496 IPR003439 GO:0005524
Lele40g0494 1499 ProSitePatterns ABC transporters family signature. 776 790 IPR017871 GO:0005524|GO:0016887
Lele40g0494 1499 Gene3D - 1250 1495 IPR027417 -
Lele40g0494 1499 Gene3D - 636 880 IPR027417 -
Lele40g0494 1499 CDD ABC_6TM_MRP7_D2_like 941 1240 - -
Lele40g0494 1499 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 249 1495 - -
Lele40g0494 1499 FunFam ABC transporter C family member 13 629 884 - -
Lele40g0494 1499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 663 861 IPR027417 -
Lele40g0494 1499 Pfam ABC transporter 1281 1427 IPR003439 GO:0005524
Lele40g0494 1499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1256 1495 IPR027417 -
Lele40g0494 1499 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 942 1228 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele40g0494 1499 CDD ABC_6TM_MRP7_D1_like 327 612 - -
Lele40g0494 1499 FunFam ATP-binding cassette (ABC) transporter, putative 1249 1496 - -
Lele40g0494 1499 ProSitePatterns ABC transporters family signature. 1399 1413 IPR017871 GO:0005524|GO:0016887
Lele40g0494 1499 Pfam ABC transporter 669 801 IPR003439 GO:0005524
Lele40g0494 1499 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 329 604 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele40g0494 1499 FunFam ABC transporter C family member 5 907 1246 - -
Lele40g0494 1499 Gene3D ABC transporter type 1, transmembrane domain 300 622 IPR036640 GO:0005524|GO:0016020
Lele40g0494 1499 Gene3D ABC transporter type 1, transmembrane domain 906 1246 IPR036640 GO:0005524|GO:0016020
Lele40g0494 1499 SMART AAA_5 678 852 IPR003593 -
Lele40g0494 1499 SMART AAA_5 1289 1473 IPR003593 -
Lele40g0494 1499 CDD ABCC_MRP_domain2 1261 1480 - -
Lele40g0494 1499 SUPERFAMILY ABC transporter transmembrane region 319 620 IPR036640 GO:0005524|GO:0016020
Lele40g0494 1499 FunFam ATP-binding cassette subfamily C member 10 303 621 - -
Lele40g0494 1499 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 648 875 IPR003439 GO:0005524
Lele40g0494 1499 SUPERFAMILY ABC transporter transmembrane region 938 1245 IPR036640 GO:0005524|GO:0016020
Lele40g0494 1499 CDD ABCC_MRP_domain1 650 851 - -
Lele40g0494 1499 Pfam ABC transporter transmembrane region 943 1186 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele40g0494 1499 Pfam ABC transporter transmembrane region 328 592 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0494 Lele-ChrLele40 4114881 4133068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0494 668 897 Calmodulin-binding Proteins AT2G36910 28.629 2.82e-21 99.4