Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0487 ATGTTAATACCGGCAACCACCGATGATGCTGGTTATGAGAAACATGAACCTGCAAACATGCGTGCTTCCCTAAAACGGATTCCAGAAAACAATATCAGTGATCCAAAGGCCAATCAAAGGACAAGGAAGAGTAGAAGTTCATCTGAGTCATTGGATCACATAATGCCTGAGAGAAAAAGGAGACAAGAACTCACTGAGAAGTTTATTGCACTCTCTGCTGCAATTCCTGGTCTCAAGAAGAGGAAAAAATCATCCCATCACCTCAAGGCTGAAGATCATCATCATCATCAAGACACAATATCTTCTGAAACAATGATGAGCTCTGATGATTGCTTCACAATGAACGAAGCATTACCTGAAGTTGAAGCAAGAGTTTTACACAACGAAGTTCTAATCAGAATCCAATGTGAGAAGAAGCAAACAAGTGTTATGCTTAATATATTAATCGGCCCCCAACTCAAGAGCCTCCATTTCTCCATAATCAGAACTAGCGTCTTCACCTTTGGCAATTCTGCTCTTGACATTACCATTATAGCTGAGGTACACATTCATCTATACATACTATCAATTAAGAACAGTTAA 582 0.3952 MLIPATTDDAGYEKHEPANMRASLKRIPENNISDPKANQRTRKSRSSSESLDHIMPERKRRQELTEKFIALSAAIPGLKKRKKSSHHLKAEDHHHHQDTISSETMMSSDDCFTMNEALPEVEARVLHNEVLIRIQCEKKQTSVMLNILIGPQLKSLHFSIIRTSVFTFGNSALDITIIAEVHIHLYILSIKNS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0487 193 MobiDBLite consensus disorder prediction 36 59 - -
Lele40g0487 193 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 47 86 IPR036638 GO:0046983
Lele40g0487 193 MobiDBLite consensus disorder prediction 1 59 - -
Lele40g0487 193 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 48 97 IPR011598 GO:0046983
Lele40g0487 193 MobiDBLite consensus disorder prediction 78 103 - -
Lele40g0487 193 PANTHER BHLH TRANSCRIPTION FACTOR 83 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0487 Lele-ChrLele40 4057662 4058490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0487 44 187 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22760 34.857 3.15e-22 89.4