Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0484 ATGAGTAATTTTCTTGTTATGTTCCTGCTCATTTGGGCATCAAGCTTTTATCCTTCAGTTTCTCATTTTTTTGTAAATGCTCAAGCTGAATCTCCAGAAGCTGCAAAAGGGGTGTCACTTAGCCCTGTTGATGTTAAATTGAATTACTCAAAAGTGGTAGATAAGAAGAGTTCAATTGCTATATTTGACTTTCAGTTGTTAGAGGTTGCAACAAACAGCTTTGACAAAAGTAATATTCTGGGTGAGAGTGGTTCTAGGATAGTGTACAGAGCTTGTTTTGATGAGCATCTCAATGCAGCTGTAAAGAAAGCAGATAGCAGTGCGGATAGAGACTTTGAGAATGAAGTGAATTGGTTAAGCAAGATTCGGCATCAGAACATCATTAAACTTCTTGGTTACTGTATTCATGGTGAATCAAGGTTTCTTGTATATGAAATGATGGAGAATGGATATTTGGAAACTCAATTACATGGGCGTAGTCATGAATCATCTTTAAATTGGCACCTCCGGTTAAAGATTGCCGTTGATGTTGCCAGGCTGATCTTGACAATATCTGGATCTGTTAGGGCATTAGAATATCTCCATGAGCACTCTAATCCTCCTGTGGTTCATAGAGACCTGAAATCTTCTAATGTTCTTCTGGATTCTCACTTTAATGCCAAGCTATCAGATTTTGGGCTTGCTGTAAGTTCTGGAATGCAAGACAAGAACATAAAGATGTCAGGAACTTTGGGTTATGTAGCACCTGAGTACATATCACATGGAAGAAAAGCCATGGACAAGATGTCCTCAGATCAATACCAATCCCTTGTCACATGGGCTATGCCTCAGCTAACTGACAGATCAAAGCTTCCAAGTATTATAGATCCTGTAATCAGAAACACAATGGATTTGAAGCATTTATATCAGGTTGCTGCAGTGGCTGTACTTTGTGTACAACCAGAACCAAGTTATCGACCACTAATAACCGATGTCCTGCACTCTCTCATCCCTTTGGTACCGACGGAGCTCGGAGGGTCACTAAGAATTTCAGAATCTGTCTGA 1044 0.3975 MSNFLVMFLLIWASSFYPSVSHFFVNAQAESPEAAKGVSLSPVDVKLNYSKVVDKKSSIAIFDFQLLEVATNSFDKSNILGESGSRIVYRACFDEHLNAAVKKADSSADRDFENEVNWLSKIRHQNIIKLLGYCIHGESRFLVYEMMENGYLETQLHGRSHESSLNWHLRLKIAVDVARLILTISGSVRALEYLHEHSNPPVVHRDLKSSNVLLDSHFNAKLSDFGLAVSSGMQDKNIKMSGTLGYVAPEYISHGRKAMDKMSSDQYQSLVTWAMPQLTDRSKLPSIIDPVIRNTMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPTELGGSLRISESV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0484 347 Gene3D Transferase(Phosphotransferase) domain 1 147 256 - -
Lele40g0484 347 Pfam Protein kinase domain 76 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0484 347 Gene3D Phosphorylase Kinase; domain 1 40 146 - -
Lele40g0484 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Lele40g0484 347 Gene3D Transferase(Phosphotransferase) domain 1 257 336 - -
Lele40g0484 347 PANTHER OS01G0750732 PROTEIN 34 332 - -
Lele40g0484 347 ProSiteProfiles Protein kinase domain profile. 74 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0484 347 SUPERFAMILY Protein kinase-like (PK-like) 54 329 IPR011009 -
Lele40g0484 347 SMART serkin_6 74 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0484 Lele-ChrLele40 4033129 4036498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0484 4 275 Receptor kinase-like Gene Family AT1G80640 43.836 2.62e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Lele40g0484 Pkinase 7.4e-30 CL0016