Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0477 ATGTCTTTGTCTGAACACGACTATTGTCCTAAAGAAAGCTTTTGCATTTCAGTTCCATGGCAGAATTGGTTCTCCGATCTGGACATGGATGAGATCGATTTCTTCAATCAATCACACAAGACTTATTCTTTTGATGATGATGAAGAGTTTCTTAGGGAGATCTTTCGCCAACCTTCTTTCTCTTCTGAGAGTGACAGTACTCATTCTTCCTCTATTCAAAACAATGCCGTCACTGCCCCATCAGATGGTGCCGCCGCTAGGGCTACGACCCCCACAGTTAGCAGCTTATCTTTGGATAATAAAGACTCCGGCACCGGCAGCCAGCTGAAGAGTAACAGCTCGTGCTCGAGCTCAATCGTCTCGAAACTTGGAAACTTCTCGGATAAACCTGCAGTAGCGGCCACATCGTCGTCTCCGTCAACTTATATTCTGTCTTTCGATAACTCAACAGTACTACCAGCCACCTCCGATGTCGACGGTTACCGGAAACATGATGAATCCACCATGAAGAGTGGTAATCAAGAGAAATTAGAGGGTAGTAGAGGAGGAGGAGGAGGAGGAGGAGGCACACGAACTTCTCAAAAACGAACCCTAGAAAACCATAATAGTGATCATCAGCCAAAAGCTAATCAAGGGACAAAGAAGACTAGAAGTTCATCTGAGTCATTGGATCACATAATGGCGGAGAGAAAAAGGAGACAAGAACTCACCGAGAAGTTCATTGCACTCTCTGCTACAATTCCTGGTCTCAAGAAGATTGACAAGGCTTCTATACTAAGCGAAGCTACCATTCACGTGAAGCAACTTAAAGAGCGAGTGAAAGAGTTAGAGGAACAGAACAAGAAGATGAGTAGTAATGTGGAGTCAGTGTCGTACATGAAGAAGAAGAAGAAGAAGTCATCGTCGTCATCGGGCAGAGATAATATTGAAGACACAACGTCTTGTGAAATAATGAGCTCTGACGATTACTTTAAAATTAGTGAATCACTTCCTGAAGTTGAAGCAAGAGTTTTACAGAGGCAAGTTCTCATCAGAATCCACTGCGAGAATAAAAAAGGAGTTATTATCAACCTATTGGCTCAGCTCCACACTCTTCGTTTCTCCATAATCAGTCACAGTGTGTTGCCATTTGGAAATTCCACTCTTGATATTACCATTATTGCTGAGGTTGAAGAGGAACACAACATAGCAGTGAAGGAACTTGTGAAAAAGCTGAGAATGATTCTGTTGAAGTCAGCTGACTGA 1245 0.4305 MSLSEHDYCPKESFCISVPWQNWFSDLDMDEIDFFNQSHKTYSFDDDEEFLREIFRQPSFSSESDSTHSSSIQNNAVTAPSDGAAARATTPTVSSLSLDNKDSGTGSQLKSNSSCSSSIVSKLGNFSDKPAVAATSSSPSTYILSFDNSTVLPATSDVDGYRKHDESTMKSGNQEKLEGSRGGGGGGGGTRTSQKRTLENHNSDHQPKANQGTKKTRSSSESLDHIMAERKRRQELTEKFIALSATIPGLKKIDKASILSEATIHVKQLKERVKELEEQNKKMSSNVESVSYMKKKKKKSSSSSGRDNIEDTTSCEIMSSDDYFKISESLPEVEARVLQRQVLIRIHCENKKGVIINLLAQLHTLRFSIISHSVLPFGNSTLDITIIAEVEEEHNIAVKELVKKLRMILLKSAD 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0477 414 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 224 287 IPR036638 GO:0046983
Lele40g0477 414 SMART finulus 226 275 IPR011598 GO:0046983
Lele40g0477 414 MobiDBLite consensus disorder prediction 197 211 - -
Lele40g0477 414 Pfam Helix-loop-helix DNA-binding domain 225 270 IPR011598 GO:0046983
Lele40g0477 414 MobiDBLite consensus disorder prediction 277 312 - -
Lele40g0477 414 MobiDBLite consensus disorder prediction 158 172 - -
Lele40g0477 414 MobiDBLite consensus disorder prediction 60 114 - -
Lele40g0477 414 PANTHER BHLH TRANSCRIPTION FACTOR 55 411 - -
Lele40g0477 414 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 220 269 IPR011598 GO:0046983
Lele40g0477 414 Coils Coil 259 286 - -
Lele40g0477 414 MobiDBLite consensus disorder prediction 153 224 - -
Lele40g0477 414 Gene3D - 219 297 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0477 Lele-ChrLele40 3971933 3974688 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0477 224 409 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 41.711 7.07e-40 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele40g0477 HLH 3.3e-07 No_clan