Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0476 ATGGGTTTTGATTTGTCTGAAATAATGATGCAGGACATGGATGATACTGAAGACTTCCACGATCAGTTTTGTCACATGATGATGTCTTTTGATAAGGAAGACGAAGAGTTTCTCAGAAACATTCTTCAGCAGCAGCCAGCTGGTGGAAATAGGAATAATGAGTTGTCTTCTTCTTCTCAAAGCGAAGAAGATAAATCCTCTCCCACCGTAGATATCTCTACCGACGGCTCCGGCAACCGTGGCGGTGGTTCGAATGTTGACAACAAAAACCGTGTGATGTCTGCTAAATCATACATTTTATCATTTGATCAATCCAACGTAATACCAGCAGAAGAAACAATCTCAAAAAACGAAGAATCCAGTACATCTGAACTTTGTTCATTAAAAAGGATAAGAGAGACGTGTAACAATGTTGAGCCTAGAAAGAAGACTAGAAGCTGTTCAGAGACTGCAAATCACATAATGGCAGAGAGGAGGAGAAGGCAGCAGCTCACAGAGAGATTTATTGCACTTTCGGCAACTATACCGGGCTTGAAGAAGATGGACAAAGCTACAATTCTTCAAGAAGCGACGAAATACGTAAAGCAGCTTCAAGAACGAGTAACAGAGCTAGAGAAACAAAATATTGTAAACAACACTACAACATGGGACTCATCAATGATATCGATCAAGAAATGTGAGCTACACAGAATTAATGATGATTTGTGTTGTGAAGAAAATGATCAAGTGTTGCCTCAGATTGATGCAAAAGTGTTGGAGAATCAAGTGCTGTTTGGAATCTATTGTGAGAAGCAAAAGGGCATCGAATTTAAAATATTGACTTTGCTTGAGAATTTTCATCTTCATGTCACTAGTAGCAGCGTCTTGCCATTTGGGAATTCCACTCTTGGCATCACCATCATTGCCCAGATGGGGGAGGAATACAGAATGACAGTTAATGAAGTGATGAAAAACCTACGACAAGTTCTGTCAAAGTCGCACGATGCTGATCCGTACTAG 999 0.4024 MGFDLSEIMMQDMDDTEDFHDQFCHMMMSFDKEDEEFLRNILQQQPAGGNRNNELSSSSQSEEDKSSPTVDISTDGSGNRGGGSNVDNKNRVMSAKSYILSFDQSNVIPAEETISKNEESSTSELCSLKRIRETCNNVEPRKKTRSCSETANHIMAERRRRQQLTERFIALSATIPGLKKMDKATILQEATKYVKQLQERVTELEKQNIVNNTTTWDSSMISIKKCELHRINDDLCCEENDQVLPQIDAKVLENQVLFGIYCEKQKGIEFKILTLLENFHLHVTSSSVLPFGNSTLGITIIAQMGEEYRMTVNEVMKNLRQVLSKSHDADPY 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0476 332 Coils Coil 187 207 - -
Lele40g0476 332 Pfam Helix-loop-helix DNA-binding domain 151 198 IPR011598 GO:0046983
Lele40g0476 332 MobiDBLite consensus disorder prediction 44 90 - -
Lele40g0476 332 Gene3D - 147 216 IPR036638 GO:0046983
Lele40g0476 332 PANTHER BHLH TRANSCRIPTION FACTOR 23 325 - -
Lele40g0476 332 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 151 208 IPR036638 GO:0046983
Lele40g0476 332 SMART finulus 154 203 IPR011598 GO:0046983
Lele40g0476 332 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 148 197 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0476 Lele-ChrLele40 3961305 3963649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0476 132 324 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 41.038 1.15e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele40g0476 HLH 2.9e-11 No_clan