Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0475 ATGGACAAGGCATCAGTACTTAGTGGAGCCATCAATTACGTGAAGCAACTTCAAGAACGAATCAAAGAGTTAGAGGAGAAAGCCAACAAGAAGAAAAGCATAGAGTCTGCCATTTTATCCACCAAGAGATCTTCTGTTGAAGAAGAAGAAGAAGAACAAGATGATGATGTGTTGGCTGACGTGGAAGCCAGAGTTTTAGAGAGAGAAATACTCATAAGAATTAAGTGTAAGAAACAAGATGGAATTATGCTCAACATTGCGTCTCTCCTTGAAAACACTCATCTCACTATAACTAATAGCTGCGTGTTGCCATTTGCAAACTCTACTCTCGACATCACCATTATCACCCTGATGCGTGAAGAATACAGTATGACAGTTCATGATCTTGTGAAGAACTTGAGACGAGAGATCTGTTCAAGTTATGTGAGGGTGCATGAAAGGGCTGGAGTTTGA 453 0.404 MDKASVLSGAINYVKQLQERIKELEEKANKKKSIESAILSTKRSSVEEEEEEQDDDVLADVEARVLEREILIRIKCKKQDGIMLNIASLLENTHLTITNSCVLPFANSTLDITIITLMREEYSMTVHDLVKNLRREICSSYVRVHERAGV 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0475 150 Coils Coil 7 34 - -
Lele40g0475 150 MobiDBLite consensus disorder prediction 29 47 - -
Lele40g0475 150 MobiDBLite consensus disorder prediction 29 55 - -
Lele40g0475 150 Gene3D - 1 54 IPR036638 GO:0046983
Lele40g0475 150 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 29 IPR036638 GO:0046983
Lele40g0475 150 PANTHER BHLH TRANSCRIPTION FACTOR 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0475 Lele-ChrLele40 3948786 3949568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0475 2 134 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 40.260 2.82e-26 99.4