Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0444 ATGTTTCGCACACCGTCCTTGACTCTATCATCTTTCACAGTGAAGCGTTTTGTTCCAGAGGCAGGGACATTTGGAGAAGCTGGAATGGGTATGACTTGTTGCCCAATATTTTTTTGTGCAAGGGGTTCAGATCGAGAAGCACGAAGTAAGAAAGTGTCTACATGGAGAGTCTTTTCTTTGAAGGAACTACACTCAGCAACAAATAATTTTAACTATGATAACAAGCTAGGAGAAGGGGGATTTGGCAGTGTATACTGGGGCCATCTTTGGGATGGATCACAAATTGCAGTGAAGAGATTAAAAGTTTGGAGCAACAAAGCAGATATGGAATTTGCTGCTGAAGTTGAGATATTGGCCAGAGTAAGACATAAGAATCTTCTTAGTCTACGCGGCTATTGCGCTGAAGGGCAGGAAAGACTAATTGTATATGATTATATGCCAAATTTGAGCCTACTCTCTCATCTTCATAGACAGCACTCTGCAGATGGCCTTCTTAATTGGAACAGGCGCATGAATATCGCAATTGGGTCGGCTGAGGGAATAGTGTATCTTCACCACCAAGCAACACCCCACATAATCCACAGGGATATCAAATCAAGCAATGTGTTATTGGACGCAGATTTCCAGGCTCGGGTTGCTGATTTCGGTTTTGCTAAGTTGATTCCTGATGGGGCAACCCATGTGACCACGAGAGTTAAGGGAACCCTTGGCTACCTCGCGCCGGAATATGCCATGCTCGGTAAGGCATCTGAGAGTTGTGACGTCTATAGTTTTGGGATTCTCCTGCTAGAACTTGCAAGTGGCAAGAGACCAATTGAAAAACTAAGTACTTCGATGAAGCGATCAATAGCTGATTGGGCTCTACCATTGGTTATTGAGAAGAGATTTAGTCAAGTAGCAGATCCTAAGCTAAAGGGTAAGTATGCGGAGGAAGAACTCAGAAGAATGGTTCTTGTTGCCCTTGTATGTGCTCAAAGTCAGCCTGAGAAGAGACCCACCATGCTCGAGGTGGTAGAGCTGCTTAAGGGAGAATCTAAGGATAAGTTATCCGAGTTAGAAAAGAATGAATTGTTCAGAAACCCTCCAGCTTTAGAAAACAGTGATGGGGCATCAGCTGCCGAAGATAGCTCAGACTTCATCTCTGAAGAGAAGGAATCAACATTTGAGATCAAAGAGAGTAGTGAGCTATAG 1191 0.4383 MFRTPSLTLSSFTVKRFVPEAGTFGEAGMGMTCCPIFFCARGSDREARSKKVSTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGHLWDGSQIAVKRLKVWSNKADMEFAAEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHRQHSADGLLNWNRRMNIAIGSAEGIVYLHHQATPHIIHRDIKSSNVLLDADFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKRPIEKLSTSMKRSIADWALPLVIEKRFSQVADPKLKGKYAEEELRRMVLVALVCAQSQPEKRPTMLEVVELLKGESKDKLSELEKNELFRNPPALENSDGASAAEDSSDFISEEKESTFEIKESSEL 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0444 396 FunFam PTI1-like tyrosine-protein kinase At3g15890 42 145 - -
Lele40g0444 396 FunFam PTI1-like tyrosine-protein kinase At3g15890 146 357 - -
Lele40g0444 396 Gene3D Phosphorylase Kinase; domain 1 41 145 - -
Lele40g0444 396 ProSitePatterns Protein kinases ATP-binding region signature. 76 98 IPR017441 GO:0005524
Lele40g0444 396 CDD STKc_IRAK 76 343 - -
Lele40g0444 396 Pfam Protein kinase domain 71 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0444 396 Coils Coil 335 355 - -
Lele40g0444 396 Gene3D Transferase(Phosphotransferase) domain 1 146 359 - -
Lele40g0444 396 ProSiteProfiles Protein kinase domain profile. 70 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0444 396 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 383 - -
Lele40g0444 396 MobiDBLite consensus disorder prediction 352 396 - -
Lele40g0444 396 MobiDBLite consensus disorder prediction 377 396 - -
Lele40g0444 396 SMART serkin_6 70 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele40g0444 396 SUPERFAMILY Protein kinase-like (PK-like) 50 341 IPR011009 -
Lele40g0444 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0444 Lele-ChrLele40 3683942 3687017 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele40g0444 58 344 Trihelix Transcription Factor Family AT1G70460 50.172 2.32e-92 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lele40g0444 Pkinase 7e-45 CL0016